Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0400 |
Symbol | prmA |
ID | 4479307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 458969 |
End bp | 459850 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639724936 |
Product | ribosomal protein L11 methyltransferase |
Protein accession | YP_868049 |
Protein GI | 117918857 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0151894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0533338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTGGA TCCAACTTCG CATTAACACT AACAGTGACG ATGCTGAAAC CATCAGCGAC TTACTTATGG AAGAAGGCGC CGTTTCTATT ACCTTTGAAG ATGGTAAAGA CACCCCGATT TTTGAGCCTA AACTGGGCGA AACCCCTCTG TGGCAAGATA CCGTAGTGGT TGCCCTGTTC GAGGCTGACA CAGATCTCGC ACCGACTATC GAGATGCTGA AAACCCTGCC GTTTTTAGGC GAGCACTTCA GCCACAAAAT CGAGCAAATT GAAGATAAAG ACTGGGTTCG CGAGTGGATG GATAACTACC ACCCAATCCA ATTTGGTAAA CGCCTATGGA TTTGCCCAAG CTGGCGTGAA GTTCCCGATC CAAGCGCAGT GAACGTGATC TTAGATCCGG GCCTTGCCTT CGGCACAGGC ACTCACCCAA CGACAGCACT GTGTTTAGAG TGGTTAGATA GCTTAGATCT CAGCAACGAA GAAGTGATCG ACTTTGGCTG CGGCTCAGGC ATTCTCGCCG TGGCGGCGCT GAAACTGGGC GCAAAAAAGG TCACAGGTAT CGATATCGAC TATCAAGCCA TCGAAGCCTC TAAAGCCAAT GCCGAGCGTA ATGATGTTGC CGACCAATTA GCACTTTATC TGCCAGAAGA TCAACCCGCC GATCTTAAGG CCGATGTGTT AGTTGCCAAT ATTCTCGCAG GCCCACTGCG TGAACTTGCC CCCCTTATCG CCGAGCGCGT CAAATCTGGC GGTAAATTAG CCCTCTCAGG ACTGCTTAAA GAGCAAGCGC AAGAAATCTC TGACTTCTAT AGCCAATGGT TCGACATGGA CGAAGCGGCT CACAAAGAAG ATTGGAGCCG CTTGACAGGT AAGCGCAAAT AA
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Protein sequence | MPWIQLRINT NSDDAETISD LLMEEGAVSI TFEDGKDTPI FEPKLGETPL WQDTVVVALF EADTDLAPTI EMLKTLPFLG EHFSHKIEQI EDKDWVREWM DNYHPIQFGK RLWICPSWRE VPDPSAVNVI LDPGLAFGTG THPTTALCLE WLDSLDLSNE EVIDFGCGSG ILAVAALKLG AKKVTGIDID YQAIEASKAN AERNDVADQL ALYLPEDQPA DLKADVLVAN ILAGPLRELA PLIAERVKSG GKLALSGLLK EQAQEISDFY SQWFDMDEAA HKEDWSRLTG KRK
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