Gene Shewana3_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0400 
SymbolprmA 
ID4479307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp458969 
End bp459850 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content50% 
IMG OID639724936 
Productribosomal protein L11 methyltransferase 
Protein accessionYP_868049 
Protein GI117918857 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID[TIGR00406] ribosomal protein L11 methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0151894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0533338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTGGA TCCAACTTCG CATTAACACT AACAGTGACG ATGCTGAAAC CATCAGCGAC 
TTACTTATGG AAGAAGGCGC CGTTTCTATT ACCTTTGAAG ATGGTAAAGA CACCCCGATT
TTTGAGCCTA AACTGGGCGA AACCCCTCTG TGGCAAGATA CCGTAGTGGT TGCCCTGTTC
GAGGCTGACA CAGATCTCGC ACCGACTATC GAGATGCTGA AAACCCTGCC GTTTTTAGGC
GAGCACTTCA GCCACAAAAT CGAGCAAATT GAAGATAAAG ACTGGGTTCG CGAGTGGATG
GATAACTACC ACCCAATCCA ATTTGGTAAA CGCCTATGGA TTTGCCCAAG CTGGCGTGAA
GTTCCCGATC CAAGCGCAGT GAACGTGATC TTAGATCCGG GCCTTGCCTT CGGCACAGGC
ACTCACCCAA CGACAGCACT GTGTTTAGAG TGGTTAGATA GCTTAGATCT CAGCAACGAA
GAAGTGATCG ACTTTGGCTG CGGCTCAGGC ATTCTCGCCG TGGCGGCGCT GAAACTGGGC
GCAAAAAAGG TCACAGGTAT CGATATCGAC TATCAAGCCA TCGAAGCCTC TAAAGCCAAT
GCCGAGCGTA ATGATGTTGC CGACCAATTA GCACTTTATC TGCCAGAAGA TCAACCCGCC
GATCTTAAGG CCGATGTGTT AGTTGCCAAT ATTCTCGCAG GCCCACTGCG TGAACTTGCC
CCCCTTATCG CCGAGCGCGT CAAATCTGGC GGTAAATTAG CCCTCTCAGG ACTGCTTAAA
GAGCAAGCGC AAGAAATCTC TGACTTCTAT AGCCAATGGT TCGACATGGA CGAAGCGGCT
CACAAAGAAG ATTGGAGCCG CTTGACAGGT AAGCGCAAAT AA
 
Protein sequence
MPWIQLRINT NSDDAETISD LLMEEGAVSI TFEDGKDTPI FEPKLGETPL WQDTVVVALF 
EADTDLAPTI EMLKTLPFLG EHFSHKIEQI EDKDWVREWM DNYHPIQFGK RLWICPSWRE
VPDPSAVNVI LDPGLAFGTG THPTTALCLE WLDSLDLSNE EVIDFGCGSG ILAVAALKLG
AKKVTGIDID YQAIEASKAN AERNDVADQL ALYLPEDQPA DLKADVLVAN ILAGPLRELA
PLIAERVKSG GKLALSGLLK EQAQEISDFY SQWFDMDEAA HKEDWSRLTG KRK