More than 300 homologs were found in PanDaTox collection
for query gene Cthe_2126 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009012  Cthe_2126  binding-protein-dependent transport systems inner membrane component  100 
 
 
284 aa  568  1e-161  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2160  binding-protein-dependent transport systems inner membrane component  46.26 
 
 
292 aa  259  4e-68  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.07173  n/a   
 
 
-
 
NC_011830  Dhaf_1667  binding-protein-dependent transport systems inner membrane component  46.13 
 
 
290 aa  226  2e-58  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0492  binding-protein-dependent transport systems inner membrane component  46.3 
 
 
290 aa  206  3e-52  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0262596 
 
 
-
 
NC_010001  Cphy_1090  binding-protein-dependent transport systems inner membrane component  39.47 
 
 
294 aa  206  3e-52  Clostridium phytofermentans ISDg  Bacteria  normal  0.909661  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  35 
 
 
321 aa  179  5.999999999999999e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
314 aa  167  1e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
316 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  38.53 
 
 
315 aa  164  1.0000000000000001e-39  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  36.68 
 
 
314 aa  162  5.0000000000000005e-39  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  36.68 
 
 
314 aa  162  5.0000000000000005e-39  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
300 aa  162  8.000000000000001e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  34.47 
 
 
287 aa  156  3e-37  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
305 aa  156  3e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  31.93 
 
 
321 aa  154  1e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  29.23 
 
 
305 aa  154  2e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  34.3 
 
 
321 aa  154  2e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
308 aa  154  2e-36  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  34.97 
 
 
294 aa  153  2.9999999999999998e-36  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_05100  permease component of ABC-type sugar transporter  32.53 
 
 
316 aa  152  4e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
306 aa  152  5.9999999999999996e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
316 aa  151  8.999999999999999e-36  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
294 aa  150  2e-35  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  36.91 
 
 
324 aa  150  3e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  37.44 
 
 
313 aa  149  5e-35  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
317 aa  149  6e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
294 aa  147  1.0000000000000001e-34  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  39.3 
 
 
292 aa  148  1.0000000000000001e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
318 aa  148  1.0000000000000001e-34  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  34.57 
 
 
296 aa  147  2.0000000000000003e-34  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  34.91 
 
 
305 aa  146  3e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1616  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
429 aa  146  5e-34  Thermosipho melanesiensis BI429  Bacteria  normal  0.225919  n/a   
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
321 aa  145  6e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  32.55 
 
 
294 aa  145  6e-34  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  32.39 
 
 
293 aa  145  8.000000000000001e-34  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  32.39 
 
 
293 aa  145  9e-34  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
299 aa  144  1e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
420 aa  144  1e-33  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  35.08 
 
 
317 aa  144  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  32.36 
 
 
314 aa  144  1e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
309 aa  144  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
293 aa  144  2e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  35.5 
 
 
319 aa  144  2e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
314 aa  144  2e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_3328  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
318 aa  144  2e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal  0.953703 
 
 
-
 
NC_011369  Rleg2_4016  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
319 aa  144  2e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3142  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
325 aa  143  3e-33  Arthrobacter sp. FB24  Bacteria  normal  0.406302  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
300 aa  143  4e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
296 aa  142  5e-33  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  36.25 
 
 
420 aa  142  6e-33  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2034  binding-protein-dependent transport systems inner membrane component  34.76 
 
 
323 aa  142  6e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.059557  normal  0.598754 
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
319 aa  142  7e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_012669  Bcav_0792  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
320 aa  142  7e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00615148 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  32.33 
 
 
299 aa  142  8e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  30.58 
 
 
319 aa  141  9.999999999999999e-33  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  35.19 
 
 
321 aa  141  9.999999999999999e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
317 aa  140  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  38.12 
 
 
313 aa  140  1.9999999999999998e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  31.69 
 
 
320 aa  140  1.9999999999999998e-32  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  30.58 
 
 
319 aa  140  1.9999999999999998e-32  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  30.26 
 
 
283 aa  140  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
307 aa  140  3e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
314 aa  139  3.9999999999999997e-32  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
310 aa  139  3.9999999999999997e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
307 aa  139  4.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
318 aa  139  6e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  32.73 
 
 
288 aa  139  7e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013595  Sros_5821  sugar ABC transporter, permease protein  34.38 
 
 
315 aa  139  7e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.286987  normal  0.812253 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
316 aa  138  8.999999999999999e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013595  Sros_7694  ABC transporter membrane spanning protein (sugar)  34.19 
 
 
312 aa  138  1e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal  0.6921 
 
 
-
 
NC_013521  Sked_05250  carbohydrate ABC transporter membrane protein  33.7 
 
 
309 aa  137  1e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  30.2 
 
 
307 aa  137  1e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  30.2 
 
 
307 aa  137  1e-31  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  36.32 
 
 
322 aa  137  1e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_013595  Sros_3307  sugar transport system (permease)  32.41 
 
 
325 aa  138  1e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.175437 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
317 aa  138  1e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_7905  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
336 aa  137  2e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5581  ABC transporter membrane spanning protein (galacturonic acid)  38.89 
 
 
314 aa  137  2e-31  Agrobacterium vitis S4  Bacteria  normal  0.512211  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  31.12 
 
 
309 aa  137  2e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_19290  carbohydrate ABC transporter membrane protein  33.21 
 
 
328 aa  137  2e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0926617  n/a   
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
314 aa  136  3.0000000000000003e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
318 aa  136  3.0000000000000003e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  32.13 
 
 
300 aa  137  3.0000000000000003e-31  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
292 aa  137  3.0000000000000003e-31  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  30.99 
 
 
298 aa  137  3.0000000000000003e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
308 aa  136  4e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
295 aa  136  4e-31  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
311 aa  136  5e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
314 aa  136  5e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
305 aa  135  6.0000000000000005e-31  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
307 aa  135  7.000000000000001e-31  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
318 aa  135  7.000000000000001e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
319 aa  135  8e-31  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
293 aa  135  8e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
302 aa  135  9e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
292 aa  134  9.999999999999999e-31  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_014210  Ndas_0753  binding-protein-dependent transport systems inner membrane component  34.66 
 
 
312 aa  134  9.999999999999999e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.308461  normal 
 
 
-
 
NC_013517  Sterm_4036  binding-protein-dependent transport systems inner membrane component  36.72 
 
 
291 aa  135  9.999999999999999e-31  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  39.39 
 
 
291 aa  134  9.999999999999999e-31  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  29.45 
 
 
353 aa  134  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
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