| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5821 |
|---|
| Symbol | |
|---|
| ID | 8669115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 6387868 |
|---|
| End bp | 6388815 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | sugar ABC transporter, permease protein |
|---|
| Protein accession | YP_003341309 |
|---|
| Protein GI | 271967113 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.286987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.812253 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCA CCCACGCGGC GGCGCCCCCG CGGGCGCGCC GCGAGGGCCG CAAGGCCCTC
CTCTGGATGT CACCCTGGCT GGTCGGGTTC GCGGTCTTCT TCGTCTACCC CCTCGTGGCG
ACGGCCTACT TCTCCTTCCA CCGCTACGAC CTGTTCACGC TGGAGTTCGT CGGCCTGGAC
AACTACCGCT ACTTCTTCCA TGACGACCGG GCCTGGGTCT CCATCAGGAA CACGCTGTGG
CTGGTGGTGT TCATGGTCCC CGCGCAGGTG CTCTTCGGCC TGGCCGTGGC CCAGCTCCTC
ACCCGCCTGA AGGCGGGCGC GGGCTTCTTC CGCACGGTGT TCTACCTGCC GTCGCTGGTG
CCGCTGGTGG CCGGGACCGT CTCCTTCGTC TTCCTGATGA ACCCCTCCGG ACCGCTCAAC
CAGATCATCG AGTTCTTCGG GATCGCCGCC CCCGACTGGT TCGGCGACAA GGACTGGGCC
AAGCCCGGCC TGACCCTGCT GGCCATGTGG GGCATCGGCA ACACGATGAT GATCTTCCTC
GCGGCGCTGC TGGACGTGCC CAAGCACCTG TACGAGGCCG CGGCCATCGA CGGGGCGGGC
GGGTGGCGGC AGTTCCGGAG CATCACACTG CCGATGATCT CCCCGGTGCT GATGTTCTCC
ACGGTCACCG GCGTCATCTA CGCCCTGCAG TACTTCACCC AGGCGATGAT CGCCTCCCGG
GTCGCCGCCG GGGTCACCGA CTCCCCCGGC AGCAGCTTCG TGCCGGGCTA CCCCGAGATG
TCCACGCTGA CGCTGCCCCA GTGGCTGTTC CACGCGGGCT TCCGCGACTT CAGCATGGGC
TACGCCTGCG TGCTGGCGCT GCTGCTGTTC GCGGCCTCCA TGATCTTCAC CCTCGTCCTG
CTCCGCCGGT TCCGCGCGTT CACCGACGAC GAAGGAGGCA ACCGGTGA
|
|---|
| Protein sequence | MSVTHAAAPP RARREGRKAL LWMSPWLVGF AVFFVYPLVA TAYFSFHRYD LFTLEFVGLD
NYRYFFHDDR AWVSIRNTLW LVVFMVPAQV LFGLAVAQLL TRLKAGAGFF RTVFYLPSLV
PLVAGTVSFV FLMNPSGPLN QIIEFFGIAA PDWFGDKDWA KPGLTLLAMW GIGNTMMIFL
AALLDVPKHL YEAAAIDGAG GWRQFRSITL PMISPVLMFS TVTGVIYALQ YFTQAMIASR
VAAGVTDSPG SSFVPGYPEM STLTLPQWLF HAGFRDFSMG YACVLALLLF AASMIFTLVL
LRRFRAFTDD EGGNR
|
|---|
| |