Gene Dtox_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0492 
Symbol 
ID8427427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp503978 
End bp504850 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content43% 
IMG OID645032863 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003190041 
Protein GI258513819 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0262596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACTG GAAAATTAAA AACTAATAAC GGCTATCTGA CCTGGCTTTT CCTCTGGCCC 
AGCCTGCTGG GTTTTTCTCT TTTTTATTTG CTTCCGTTTG TTACCGGCTT TTACTATTCC
CTGGTGGACA GTCCCATTAA CGGTACTTTT GTTGGATTAC ATAATTACGG TGCTTTGTTA
AAAAACCCGA GCTTTTTATC AGCTCTGGCG AATACAGCCA AGTTTACTTT AATCTGTGTA
CCTCTTAATA TGATTCTCTC CCTGGGAGTG GCCTTGTTAT TGAACCAAAA ATTACCGGGC
CGGAATCTGT TTCGCACCAT CATGATAACT CCTTTGGTGG TACCCGTAGC CTCGGTTGTT
TTGGTCTGGC AGGCTTTCTT TGATTTAAAC GGCGTTTTAA ATTCCCTGAT CCATGCTCTG
GGTTACCCGC CCGTGGACTG GATGAAAACC AACTGGTCCA TTATGGTGGT CCTGGTGGGT
TATCTATGGA AAAACACTGG TTACAGCGTA ATCCTGTTTC TGGCCGGATT GCAAAATATA
CCGGCTGAAT ACTGCGAAGT AGCCAGGATC GACGGGGCCA GCCGCCGGCA GGAGTTTTTC
CGAATAACCC TGGTTTATTT GACTCCCACA ACTTTTTTTG TTTTTGTTAT CTCGATTATC
AATTCATTTA AAGTGTTTCG GGAGACGTAT CTTATCTCCG GAGAATATCC CCATAACAGC
ATCTATATGC TGCAGCACTA CATGAACAAT ATGTTCATGG CTCTGGATTA CCAAAAATTG
ACTTCCGCAG CCTTCATTAT GGCTGCCTTT ATCGCAGCCG TCGTTTTAGT GCTTTTTATC
GTGGAGAGAA AGATCAGCAA CATGATTAAT TAA
 
Protein sequence
MRTGKLKTNN GYLTWLFLWP SLLGFSLFYL LPFVTGFYYS LVDSPINGTF VGLHNYGALL 
KNPSFLSALA NTAKFTLICV PLNMILSLGV ALLLNQKLPG RNLFRTIMIT PLVVPVASVV
LVWQAFFDLN GVLNSLIHAL GYPPVDWMKT NWSIMVVLVG YLWKNTGYSV ILFLAGLQNI
PAEYCEVARI DGASRRQEFF RITLVYLTPT TFFVFVISII NSFKVFRETY LISGEYPHNS
IYMLQHYMNN MFMALDYQKL TSAAFIMAAF IAAVVLVLFI VERKISNMIN