Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0792 |
Symbol | |
ID | 7859123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 882907 |
End bp | 883869 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643864872 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002880815 |
Protein GI | 229819289 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00615148 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGACAG TCACCGTGAC AGCACCTCCT CTCGAACGCG CACCGGCGGA GCCGGACACC CCGAGCTCCG CCGGGCGCCG CGGTCCGTCG ATCCGACGCC GCGCCGACCG CAGCGCCTAC CTGTTCCTGC TGCCCTGGTT CGTGGGCCTG CTGTTCACGC TCGTGCCCTT CGGGGCGTCG TTCTACCTGG CGTTCACCGA CTACAACCTC ATCAACCCGC CGCAGTGGAT CGGGCTCGAC AACTTCGTCG AGATGCTGAA CGACAGATAC CTCCGTCAGG CGCTCCAGGT CACGTTCACC TACACGTTCG TGTCCGTCCC CCTGTCCCTG CTCGCCGCGC TCGGCGTCGC GCTCGCGCTG AACAAGGGCA TCAAGGGCCT GCGGTACTAC CGCGCCGTGT ACTACCTGCC GTCGCTGCTC GGCGGGAGCG TCGCCATCGT CATGCTCTGG CGGTACATCT TCGGCAACGA CGGGATCATC AACGTCGTCC TGGGCTTCTT CGGGATCCAG GGCCCGAGCT GGGTGTCGGA CCCGCAGTAC GCGCTGAGCG TGCTGATCAT CCTGCACATC TGGACCTTCG GCTCACCGAT GGTGATCTTC CTCGCCGGGC TGCGGCAGAT CCCGCTCATG TACTACGAGG CGGCGAGCAT CGACGGCGCG AGCCGGTGGC GCCAGTTCCG CTCGATCACC CTCCCGCTGC TCAGCCCGAT CATCTTCTTC AACCTCGTGC TCGCGCTGAT CGGCTCGCTG CAGACCTTCA CCCAGGGCTA CATCATGAGC GGCGGCACAG GCGGCCCCTC GGGCTCCACG CTCTTCTACA ACCTCTACCT CTACATCGAG GGCTTCCAGC GGTTCGACAT GGGGTACGCC TCCGCGCTGG CGTGGCTGCT CCTCGTCATC GTGGCGCTGT TCACGGCGGC GAACTTCCTC ATGTCCCGCT TCTGGGTCTT CTACGACAAC TGA
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Protein sequence | METVTVTAPP LERAPAEPDT PSSAGRRGPS IRRRADRSAY LFLLPWFVGL LFTLVPFGAS FYLAFTDYNL INPPQWIGLD NFVEMLNDRY LRQALQVTFT YTFVSVPLSL LAALGVALAL NKGIKGLRYY RAVYYLPSLL GGSVAIVMLW RYIFGNDGII NVVLGFFGIQ GPSWVSDPQY ALSVLIILHI WTFGSPMVIF LAGLRQIPLM YYEAASIDGA SRWRQFRSIT LPLLSPIIFF NLVLALIGSL QTFTQGYIMS GGTGGPSGST LFYNLYLYIE GFQRFDMGYA SALAWLLLVI VALFTAANFL MSRFWVFYDN
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