Gene Dhaf_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1667 
Symbol 
ID7258636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1782915 
End bp1783787 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content46% 
IMG OID643561569 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002458149 
Protein GI219667714 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG GAAAATTAAA AACGAATAAC GGCGGTCTGG CCTGGTTTTT CCTGGGGCCC 
AGCCTGCTGG GCTTTGCTCT TTTTTATTTG CTCCCCTTTG TCACCGGCTT TTACTATTCC
CTGGTAGACA GTCCCCTTAA CGGTACGTTT GTCGGACTAC ATAATTACGG CGCTTTGTTA
AAAAAACCAA GCTTCTTAGC AGCTCTGGCC AATACAGCCA AGTTTACTTT AATCTGTGTA
CCCCTTAATC TGATGCTCTC CCTGGGAGCG GCCATGTTAT TGAACCAAAA ATTACCGGGC
CGGAACCTGT TCCGCACCAT TATGATCACG CCTTTGGTGG TACCCGTGGC CTCGGTGGTT
TTGGTGTGGC AGGCATTCTT TGATTTGAAC GGCGTTTTAA ATTCTCTGAT CCATGCCCTG
GGTCACCCGT CTGTGGACTG GATGAAAACC AACTGGTCCA GAGTGGTGGT CCTGGTGATT
TATCTATGGA AAAACATCGG TTACAGCGTC ATTCTGTTTC TGGCCGGATT GCAGAATATA
CCGGCTGAAT ACTACGAAGC GGCCAGGATC GACGGGGCCA GCCGCTATCA GGAGTTTTTT
CGCATAACCC TGGTCTATTT GACCCCCACG ACTTTTTTTG TTTTTGTCAT CTCGATGATC
AATTCCTTTA AAGTGTTCCG GGAGACGTAT CTTATCTCCG GAGATTATCC CCATAACAGC
ATCTATATGC TGCAGCACTA CATGAACAAT ATGTTTATGG CTTTGGATTA TCAGAAATTG
ACTTCTGCGG CCTTTATTAT GGCTGCCTTT ATCGTGGCCG TCGTTTTATT GCTTTTTATC
GTGGAGAGAA AGATCACCAA TATGATTAAT TAG
 
Protein sequence
MKTGKLKTNN GGLAWFFLGP SLLGFALFYL LPFVTGFYYS LVDSPLNGTF VGLHNYGALL 
KKPSFLAALA NTAKFTLICV PLNLMLSLGA AMLLNQKLPG RNLFRTIMIT PLVVPVASVV
LVWQAFFDLN GVLNSLIHAL GHPSVDWMKT NWSRVVVLVI YLWKNIGYSV ILFLAGLQNI
PAEYYEAARI DGASRYQEFF RITLVYLTPT TFFVFVISMI NSFKVFRETY LISGDYPHNS
IYMLQHYMNN MFMALDYQKL TSAAFIMAAF IVAVVLLLFI VERKITNMIN