More than 300 homologs were found in PanDaTox collection
for query gene Cla_0372 on replicon NC_012039
Organism: Campylobacter lari RM2100



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012039  Cla_0372  carbamoyl phosphate synthase small subunit  100 
 
 
372 aa  759    Campylobacter lari RM2100  Bacteria  normal  0.710371  n/a   
 
 
-
 
NC_003912  CJE1667  carbamoyl phosphate synthase small subunit  79.03 
 
 
372 aa  615  1e-175  Campylobacter jejuni RM1221  Bacteria  normal  0.764273  n/a   
 
 
-
 
NC_008787  CJJ81176_1486  carbamoyl phosphate synthase small subunit  79.03 
 
 
372 aa  615  1e-175  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1842  carbamoyl phosphate synthase small subunit  79.03 
 
 
372 aa  615  1e-175  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1365  carbamoyl phosphate synthase small subunit  67.47 
 
 
370 aa  522  1e-147  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0898  carbamoyl phosphate synthase small subunit  65.59 
 
 
372 aa  520  1e-146  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0374  carbamoyl phosphate synthase small subunit  65.32 
 
 
372 aa  517  1.0000000000000001e-145  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.259236  n/a   
 
 
-
 
NC_013512  Sdel_1923  carbamoyl-phosphate synthase, small subunit  61.62 
 
 
376 aa  484  1e-136  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0080  carbamoyl phosphate synthase small subunit  57.68 
 
 
381 aa  453  1.0000000000000001e-126  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0555876  n/a   
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  45.21 
 
 
367 aa  319  3.9999999999999996e-86  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  46.7 
 
 
376 aa  317  2e-85  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  41.98 
 
 
377 aa  317  2e-85  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  43.65 
 
 
369 aa  310  2e-83  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  44.15 
 
 
371 aa  309  5.9999999999999995e-83  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  42.74 
 
 
367 aa  308  9e-83  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  42.82 
 
 
369 aa  307  3e-82  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  42.93 
 
 
374 aa  306  5.0000000000000004e-82  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  42.51 
 
 
374 aa  305  8.000000000000001e-82  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  42.41 
 
 
366 aa  305  1.0000000000000001e-81  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  42.93 
 
 
374 aa  303  3.0000000000000004e-81  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  42.13 
 
 
374 aa  300  2e-80  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  42.4 
 
 
373 aa  299  4e-80  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  43.09 
 
 
369 aa  297  2e-79  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  40.91 
 
 
373 aa  297  2e-79  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  42.86 
 
 
356 aa  296  5e-79  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  40.64 
 
 
391 aa  295  7e-79  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  39.57 
 
 
359 aa  295  1e-78  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  42.9 
 
 
383 aa  294  2e-78  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  41.29 
 
 
376 aa  294  2e-78  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  41.11 
 
 
376 aa  293  3e-78  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  41.98 
 
 
373 aa  293  4e-78  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  41.29 
 
 
385 aa  292  6e-78  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_010117  COXBURSA331_A1431  carbamoyl phosphate synthase small subunit  40.05 
 
 
382 aa  292  8e-78  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  40.96 
 
 
389 aa  292  8e-78  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_009727  CBUD_1371  carbamoyl phosphate synthase small subunit  40.05 
 
 
402 aa  291  1e-77  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  41.71 
 
 
357 aa  291  1e-77  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  39.57 
 
 
382 aa  290  2e-77  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.314254 
 
 
-
 
NC_008345  Sfri_0975  carbamoyl phosphate synthase small subunit  41.02 
 
 
381 aa  291  2e-77  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00141878  n/a   
 
 
-
 
NC_008751  Dvul_0268  carbamoyl phosphate synthase small subunit  40.63 
 
 
375 aa  290  3e-77  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.583908 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  40.75 
 
 
381 aa  289  4e-77  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  40.37 
 
 
373 aa  289  6e-77  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  41.02 
 
 
381 aa  288  8e-77  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
CP001509  ECD_00036  carbamoyl-phosphate synthase small subunit  39.3 
 
 
382 aa  288  9e-77  Escherichia coli BL21(DE3)  Bacteria  normal  0.53844  n/a   
 
 
-
 
CP001637  EcDH1_3567  carbamoyl-phosphate synthase, small subunit  39.3 
 
 
382 aa  288  9e-77  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  39.3 
 
 
382 aa  288  9e-77  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0035  carbamoyl phosphate synthase small subunit  39.3 
 
 
382 aa  288  9e-77  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0036  carbamoyl phosphate synthase small subunit  39.3 
 
 
382 aa  288  9e-77  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00035  hypothetical protein  39.3 
 
 
382 aa  288  9e-77  Escherichia coli BL21  Bacteria  normal  0.457385  n/a   
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  39.3 
 
 
391 aa  288  9e-77  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_0035  carbamoyl phosphate synthase small subunit  39.3 
 
 
382 aa  288  9e-77  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  39.68 
 
 
382 aa  288  9e-77  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  39.57 
 
 
382 aa  288  1e-76  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  39.84 
 
 
378 aa  288  1e-76  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  40.21 
 
 
379 aa  287  2e-76  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  39.62 
 
 
359 aa  287  2e-76  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_010725  Mpop_0591  carbamoyl-phosphate synthase, small subunit  41.21 
 
 
416 aa  287  2e-76  Methylobacterium populi BJ001  Bacteria  normal  0.88824  normal  0.101077 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  40.91 
 
 
388 aa  287  2e-76  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_011757  Mchl_0626  carbamoyl-phosphate synthase, small subunit  40.68 
 
 
416 aa  287  2e-76  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.265795 
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  40.64 
 
 
440 aa  287  2e-76  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  38.07 
 
 
359 aa  287  2e-76  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  41.4 
 
 
397 aa  286  2.9999999999999996e-76  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  42.25 
 
 
379 aa  286  2.9999999999999996e-76  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1622  carbamoyl-phosphate synthase, small subunit  40.37 
 
 
398 aa  286  2.9999999999999996e-76  Methylocella silvestris BL2  Bacteria  n/a    decreased coverage  0.0014107 
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  42.51 
 
 
379 aa  286  2.9999999999999996e-76  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  39.42 
 
 
382 aa  286  4e-76  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  40.34 
 
 
385 aa  286  5e-76  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  39.42 
 
 
391 aa  286  5.999999999999999e-76  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0615  carbamoyl-phosphate synthase, small subunit  40.42 
 
 
416 aa  286  5.999999999999999e-76  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.156891 
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  39.15 
 
 
382 aa  285  7e-76  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  43.51 
 
 
349 aa  285  8e-76  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  39.84 
 
 
358 aa  285  9e-76  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_012880  Dd703_0592  carbamoyl-phosphate synthase, small subunit  40 
 
 
382 aa  285  9e-76  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0951  carbamoyl-phosphate synthase, small subunit  42.74 
 
 
352 aa  285  9e-76  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00000000113034  n/a   
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  40.9 
 
 
381 aa  285  9e-76  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_003910  CPS_3459  carbamoyl phosphate synthase small subunit  40.16 
 
 
383 aa  285  1.0000000000000001e-75  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0570  carbamoyl-phosphate synthase, small subunit  40.37 
 
 
410 aa  285  1.0000000000000001e-75  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.308304 
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  41.4 
 
 
364 aa  285  1.0000000000000001e-75  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  39.84 
 
 
382 aa  285  1.0000000000000001e-75  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_013421  Pecwa_3841  carbamoyl phosphate synthase small subunit  39.84 
 
 
382 aa  285  1.0000000000000001e-75  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  39.15 
 
 
382 aa  284  2.0000000000000002e-75  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  40.21 
 
 
390 aa  284  2.0000000000000002e-75  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
NC_007954  Sden_0995  carbamoyl phosphate synthase small subunit  40.48 
 
 
381 aa  283  3.0000000000000004e-75  Shewanella denitrificans OS217  Bacteria  normal  0.055995  n/a   
 
 
-
 
NC_009901  Spea_3075  carbamoyl phosphate synthase small subunit  39.95 
 
 
381 aa  283  3.0000000000000004e-75  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0335125  n/a   
 
 
-
 
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  40.96 
 
 
379 aa  283  4.0000000000000003e-75  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2314  carbamoyl-phosphate synthase, small subunit  40.05 
 
 
402 aa  283  4.0000000000000003e-75  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0322598 
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  39.19 
 
 
378 aa  283  5.000000000000001e-75  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  40.53 
 
 
386 aa  282  5.000000000000001e-75  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  40.11 
 
 
375 aa  283  5.000000000000001e-75  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4035  carbamoyl phosphate synthase small subunit  39.73 
 
 
396 aa  283  5.000000000000001e-75  Marinomonas sp. MWYL1  Bacteria  normal  0.311643  normal 
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  42.97 
 
 
349 aa  283  5.000000000000001e-75  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0878  carbamoyl-phosphate synthase, small subunit  40 
 
 
378 aa  282  6.000000000000001e-75  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3401  carbamoyl phosphate synthase small subunit  40.37 
 
 
391 aa  282  8.000000000000001e-75  Shewanella baltica OS185  Bacteria  hitchhiker  0.00720177  n/a   
 
 
-
 
NC_009052  Sbal_3305  carbamoyl phosphate synthase small subunit  40.37 
 
 
386 aa  281  1e-74  Shewanella baltica OS155  Bacteria  normal  0.314757  n/a   
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  40.37 
 
 
387 aa  281  1e-74  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_008322  Shewmr7_1003  carbamoyl phosphate synthase small subunit  39.84 
 
 
386 aa  281  1e-74  Shewanella sp. MR-7  Bacteria  normal  0.0354323  normal 
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  40.37 
 
 
386 aa  281  1e-74  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  41.76 
 
 
379 aa  281  2e-74  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_009952  Dshi_2387  carbamoyl phosphate synthase small subunit  39.19 
 
 
389 aa  280  2e-74  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0953377  normal  0.858607 
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  38.07 
 
 
361 aa  280  3e-74  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  40.86 
 
 
351 aa  280  3e-74  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
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