| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_0080 |
|---|
| Symbol | |
|---|
| ID | 3763795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 87099 |
|---|
| End bp | 88244 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_392596 |
|---|
| Protein GI | 78776281 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0555876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGG AATTATTAAA AAAAAGAGCT TGGATTTATC TTGAAAATGG AATTTTTTTA
GAGGCAAATA GCTTTGGGGC AGAGAGTACC GTCGTTGGTG AAATAGTTTT TAACGTATCA
ATGAGTGGTT ATCAAGAGAT TATGTCTGAT CCATCTTATG CAGGTCAATT TGTAACATTT
ACTATGCCAG AGATTGGAAA TGTTGGTGTT AATGCTCAAG ATATGGAGAG TAAATCAGCA
CATGCTAAAG GGATGATAGT TAGAAAGTAT CAAGATAGAT ACTCTAGCTT TAGAGCAGAA
GACTCTCTCT CTAATTTCTT AAAAAAACAA AATGTTATGG GTATTTGCGA TATTGATACA
AGATACTTAA CTAAAATGCT AAGAGAAGAG GGGTCTATGA TGATGATAGC TTCAACTGAA
ATTAGCAACA AAGATGAGTT GAAGAAAATT TTACAAAATA GCTCTAGAAT AGAACATGTA
AATTATATAG AACAAGTTAG CACAAAAGTA GCATATAAAC ATACTCAATC AACATATAAT
GATAGAGAGT TTAAATTTGA TGAAGCTCCA GCATCTGAGG CAAATATAGT AGTTTTGGAT
TTTGGCGTAA AAACAAATAT CTTAAATGAG CTGGTAAGTG CAAAAATTGG CGTAGAGGTA
ATCCCAAATA ACTTTAGTGG CGATGAGCTT ATAAAAAGAT ACAACAACAA AGAGATTGAT
GGAGTCTTCT TGTCAAACGG CCCTGGAGAC CCACTTGTGC TAAAGCATGA ACAAAGAGAG
ATTAAAAAAT TAATAGACGC AAAAGTTCCT ATGTTTGGGA TTTGTCTTGG TCATCAACTT
CTCTCTATTG CTCATGGATA TGATACTTTT AAACTAAAAT TTGGTCACCA TGGTGGAAAT
CAGCCTGTAA AAAATATGAG AACAGGATTG GTAGAGATTA CTGCTCAAAA TCATAACTAT
AATGTTCCAG ATAATATTGT AGAAGTTGCA GAAGTGACAC ATACGAATTT ATTTGATAAC
ACAATTGAGG GTCTAAAGTA CAACGACTCC CCAATATTCT CTGTTCAGCA TCACCCAGAA
TCTAGTCCTG GACCAAAAGA GAGCAGATAT ATCTTCAACG AGTTCTTATC TTTAATTAAA
AGATAA
|
|---|
| Protein sequence | MSMELLKKRA WIYLENGIFL EANSFGAEST VVGEIVFNVS MSGYQEIMSD PSYAGQFVTF
TMPEIGNVGV NAQDMESKSA HAKGMIVRKY QDRYSSFRAE DSLSNFLKKQ NVMGICDIDT
RYLTKMLREE GSMMMIASTE ISNKDELKKI LQNSSRIEHV NYIEQVSTKV AYKHTQSTYN
DREFKFDEAP ASEANIVVLD FGVKTNILNE LVSAKIGVEV IPNNFSGDEL IKRYNNKEID
GVFLSNGPGD PLVLKHEQRE IKKLIDAKVP MFGICLGHQL LSIAHGYDTF KLKFGHHGGN
QPVKNMRTGL VEITAQNHNY NVPDNIVEVA EVTHTNLFDN TIEGLKYNDS PIFSVQHHPE
SSPGPKESRY IFNEFLSLIK R
|
|---|
| |