179 homologs were found in PanDaTox collection
for query gene CA2559_04390 on replicon NC_014230
Organism: Croceibacter atlanticus HTCC2559



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014230  CA2559_04390  branched-chain amino acid transport system carrier protein  100 
 
 
425 aa  831    Croceibacter atlanticus HTCC2559  Bacteria  normal  0.81441  n/a   
 
 
-
 
NC_008262  CPR_0599  branched-chain amino acid transport system II carrier protein  38.32 
 
 
424 aa  253  6e-66  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0613  branched-chain amino acid transport system II carrier protein  37.97 
 
 
424 aa  252  1e-65  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1889  branched-chain amino acid transport system II carrier protein  35.31 
 
 
462 aa  236  8e-61  Treponema denticola ATCC 35405  Bacteria  unclonable  0.000000356974  n/a   
 
 
-
 
NC_008262  CPR_0049  branched-chain amino acid transport system II carrier protein  35.18 
 
 
428 aa  234  2.0000000000000002e-60  Clostridium perfringens SM101  Bacteria  normal  0.17103  n/a   
 
 
-
 
NC_010718  Nther_1076  branched-chain amino acid transport system II carrier protein  35.05 
 
 
432 aa  233  4.0000000000000004e-60  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00600309 
 
 
-
 
NC_008261  CPF_0050  branched-chain amino acid transport system II carrier protein  34.77 
 
 
428 aa  231  1e-59  Clostridium perfringens ATCC 13124  Bacteria  normal  0.973041  n/a   
 
 
-
 
NC_011830  Dhaf_2270  branched-chain amino acid transport system II carrier protein  33.18 
 
 
437 aa  218  2e-55  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000000730131  n/a   
 
 
-
 
NC_013171  Apre_1412  branched-chain amino acid transport system II carrier protein  34.33 
 
 
441 aa  214  2.9999999999999995e-54  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3188  branched-chain amino acid transport system II carrier protein  32.24 
 
 
436 aa  208  1e-52  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.00000000414074  n/a   
 
 
-
 
NC_010718  Nther_2703  branched-chain amino acid transport system II carrier protein  35.64 
 
 
414 aa  206  8e-52  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I0560  branched chain amino acid transport system II carrier protein  33.1 
 
 
437 aa  204  3e-51  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43920  branched chain amino acid transporter  33.65 
 
 
437 aa  203  5e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0388  branched-chain amino acid transport system II carrier protein  32.06 
 
 
445 aa  199  6e-50  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1152  branched-chain amino acid transport system II carrier protein  33.64 
 
 
434 aa  199  6e-50  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.291372  n/a   
 
 
-
 
NC_009656  PSPA7_3684  branched chain amino acid ABC transporter  33.33 
 
 
548 aa  199  7e-50  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1310  branched-chain amino acid transport system II carrier protein  32.22 
 
 
434 aa  198  2.0000000000000003e-49  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.976834  n/a   
 
 
-
 
NC_009674  Bcer98_1161  branched-chain amino acid transport system II carrier protein  30.95 
 
 
451 aa  197  2.0000000000000003e-49  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.328055  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1365  branched-chain amino acid transport system II carrier protein  31.78 
 
 
451 aa  197  3e-49  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00132143  n/a   
 
 
-
 
NC_008261  CPF_0392  branched-chain amino acid transport system II carrier protein  32.21 
 
 
445 aa  197  4.0000000000000005e-49  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3237  branched-chain amino acid transport system II carrier protein  32.55 
 
 
443 aa  194  2e-48  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.188718  n/a   
 
 
-
 
NC_011658  BCAH187_A1603  branched-chain amino acid transport system II carrier protein  32.22 
 
 
451 aa  194  3e-48  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000188549  n/a   
 
 
-
 
NC_011772  BCG9842_B3254  branched-chain amino acid transport system II carrier protein  32.63 
 
 
450 aa  194  3e-48  Bacillus cereus G9842  Bacteria  normal  0.104949  normal  0.486135 
 
 
-
 
NC_011725  BCB4264_A2053  branched-chain amino acid transport system II carrier protein  32.39 
 
 
450 aa  193  6e-48  Bacillus cereus B4264  Bacteria  normal  0.087988  n/a   
 
 
-
 
NC_011773  BCAH820_1533  branched-chain amino acid transport system II carrier protein  32.94 
 
 
451 aa  193  6e-48  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.93507e-19 
 
 
-
 
NC_006274  BCZK1323  branched-chain amino acid transport protein  32.94 
 
 
451 aa  192  7e-48  Bacillus cereus E33L  Bacteria  decreased coverage  0.00120773  n/a   
 
 
-
 
NC_008530  LGAS_0948  branched-chain amino acid permease  30.66 
 
 
475 aa  192  9e-48  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1565  branched-chain amino acid transport system II carrier protein  31.5 
 
 
451 aa  191  1e-47  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00000310033  n/a   
 
 
-
 
NC_005945  BAS1350  branched-chain amino acid transport system II carrier protein  33.01 
 
 
451 aa  192  1e-47  Bacillus anthracis str. Sterne  Bacteria  normal  0.0128918  n/a   
 
 
-
 
NC_005957  BT9727_1324  branched-chain amino acid transport protein  32.7 
 
 
451 aa  192  1e-47  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000000172075  n/a   
 
 
-
 
NC_007530  GBAA_1459  branched chain amino acid ABC transporter carrier protein  33.01 
 
 
451 aa  192  1e-47  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.210353  n/a   
 
 
-
 
NC_009439  Pmen_2498  branched-chain amino acid transport system II carrier protein  32.52 
 
 
437 aa  191  2.9999999999999997e-47  Pseudomonas mendocina ymp  Bacteria  normal  0.331302  normal  0.203368 
 
 
-
 
NC_009513  Lreu_1811  branched-chain amino acid transport system II carrier protein  32.94 
 
 
461 aa  191  2.9999999999999997e-47  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000000231514  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1913  branched-chain amino acid transport system II carrier protein  32.16 
 
 
450 aa  191  2.9999999999999997e-47  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0827616  n/a   
 
 
-
 
NC_011725  BCB4264_A1497  branched-chain amino acid transport system II carrier protein  32.7 
 
 
451 aa  190  4e-47  Bacillus cereus B4264  Bacteria  unclonable  0.0000870089  n/a   
 
 
-
 
NC_011658  BCAH187_A2163  branched-chain amino acid transport system II carrier protein  31.92 
 
 
450 aa  190  4e-47  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3847  branched-chain amino acid transport system II carrier protein  32.17 
 
 
448 aa  188  2e-46  Bacillus cereus G9842  Bacteria  hitchhiker  0.00000203183  hitchhiker  0.00000000239284 
 
 
-
 
NC_009457  VC0395_A0193  branched chain amino acid transport system II carrier protein  31.64 
 
 
437 aa  187  2e-46  Vibrio cholerae O395  Bacteria  normal  0.820087  n/a   
 
 
-
 
NC_011773  BCAH820_2095  branched-chain amino acid transport system II carrier protein  31.29 
 
 
450 aa  186  6e-46  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS1916  branched-chain amino acid transport system II carrier protein  31.06 
 
 
448 aa  186  7e-46  Bacillus anthracis str. Sterne  Bacteria  normal  0.377142  n/a   
 
 
-
 
NC_005957  BT9727_1878  branched-chain amino acid transport system carrier protein  31.06 
 
 
448 aa  186  7e-46  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.343185  n/a   
 
 
-
 
NC_007492  Pfl01_1619  branched chain amino acid ABC transporter carrier protein  32.05 
 
 
437 aa  186  9e-46  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.758971  normal  0.0622571 
 
 
-
 
NC_009783  VIBHAR_00954  hypothetical protein  32.46 
 
 
473 aa  186  9e-46  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007530  GBAA_2063  branched chain amino acid ABC transporter carrier protein  31.06 
 
 
445 aa  186  1.0000000000000001e-45  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0050  branched-chain amino acid permease  32.8 
 
 
454 aa  185  1.0000000000000001e-45  Lactobacillus gasseri ATCC 33323  Bacteria  unclonable  0.0000000000377191  normal 
 
 
-
 
NC_009674  Bcer98_0655  branched-chain amino acid transport system II carrier protein  32.54 
 
 
438 aa  185  1.0000000000000001e-45  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.474851  n/a   
 
 
-
 
NC_006274  BCZK1869  branched-chain amino acid transport system carrier protein  30.82 
 
 
448 aa  184  2.0000000000000003e-45  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004443  branched-chain amino acid transport system carrier protein  31.25 
 
 
436 aa  184  3e-45  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1551  branched-chain amino acid transport system II carrier protein  30.93 
 
 
465 aa  184  3e-45  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.818102  n/a   
 
 
-
 
NC_003909  BCE_4673  branched-chain amino acid transport system II carrier protein  33.02 
 
 
441 aa  181  2e-44  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2206  branched-chain amino acid transport system II carrier protein  31.19 
 
 
437 aa  181  2e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4294  branched-chain amino acid transport system II carrier protein  33.26 
 
 
441 aa  181  2e-44  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1292  branched-chain amino acid transport system II carrier protein  29.28 
 
 
435 aa  181  2e-44  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2740  branched-chain amino acid transport system II carrier protein BrnQ  28.67 
 
 
441 aa  181  2e-44  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3755  branched-chain amino acid transport system II carrier protein  30.29 
 
 
437 aa  181  2.9999999999999997e-44  Pseudomonas putida GB-1  Bacteria  normal  0.642485  normal 
 
 
-
 
NC_012912  Dd1591_3102  branched-chain amino acid transport system II carrier protein  29.56 
 
 
440 aa  181  2.9999999999999997e-44  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0856  branched-chain amino acid transport system II carrier protein  33.17 
 
 
438 aa  181  2.9999999999999997e-44  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1182  branched-chain amino acid transport system II carrier protein  32.01 
 
 
440 aa  180  4.999999999999999e-44  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4283  branched-chain amino acid transport system II carrier protein  33.26 
 
 
441 aa  179  5.999999999999999e-44  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1435  branched-chain amino acid transport system II carrier protein  29.83 
 
 
420 aa  179  5.999999999999999e-44  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000424202  n/a   
 
 
-
 
NC_011773  BCAH820_4663  branched-chain amino acid transport system II carrier protein  33.26 
 
 
441 aa  179  5.999999999999999e-44  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00341134 
 
 
-
 
NC_010501  PputW619_3507  branched-chain amino acid transport system II carrier protein  30.53 
 
 
437 aa  179  7e-44  Pseudomonas putida W619  Bacteria  normal  normal  0.717571 
 
 
-
 
NC_011658  BCAH187_A0966  branched-chain amino acid transport system II carrier protein  33.65 
 
 
438 aa  179  7e-44  Bacillus cereus AH187  Bacteria  unclonable  0.0000000062732  n/a   
 
 
-
 
NC_007005  Psyr_2015  branched chain amino acid ABC transporter carrier protein  31.18 
 
 
437 aa  179  8e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.453737  normal  0.890863 
 
 
-
 
NC_006274  BCZK0700  branched-chain amino acid transport protein  33.17 
 
 
438 aa  179  1e-43  Bacillus cereus E33L  Bacteria  hitchhiker  0.000173599  n/a   
 
 
-
 
NC_009487  SaurJH9_0171  branched-chain amino acid transport system II carrier protein  31.7 
 
 
449 aa  179  1e-43  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0176  branched-chain amino acid transport system II carrier protein  31.7 
 
 
449 aa  179  1e-43  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2911  branched-chain amino acid transport system II carrier protein  30.43 
 
 
439 aa  178  2e-43  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1670  branched-chain amino acid transport system II carrier protein  29.81 
 
 
437 aa  177  3e-43  Pseudomonas putida F1  Bacteria  normal  0.129788  normal 
 
 
-
 
NC_010002  Daci_5360  branched-chain amino acid transport system II carrier protein  34.05 
 
 
437 aa  177  4e-43  Delftia acidovorans SPH-1  Bacteria  normal  0.256076  normal 
 
 
-
 
NC_011658  BCAH187_A4676  branched-chain amino acid transport system II carrier protein  33.87 
 
 
441 aa  177  4e-43  Bacillus cereus AH187  Bacteria  hitchhiker  0.000102787  n/a   
 
 
-
 
NC_009092  Shew_0769  branched-chain amino acid transport system II carrier protein  30.05 
 
 
443 aa  177  5e-43  Shewanella loihica PV-4  Bacteria  normal  0.949455  normal  0.0746903 
 
 
-
 
NC_002947  PP_4184  branched chain amino acid ABC transporter carrier protein  29.57 
 
 
437 aa  176  6e-43  Pseudomonas putida KT2440  Bacteria  normal  0.579709  normal 
 
 
-
 
NC_011773  BCAH820_3153  branched-chain amino acid transport system II carrier protein  30.98 
 
 
450 aa  176  6e-43  Bacillus cereus AH820  Bacteria  n/a    normal  0.611345 
 
 
-
 
NC_005945  BAS2920  branched-chain amino acid transport system II carrier protein  30.88 
 
 
450 aa  176  7e-43  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3142  branched chain amino acid ABC transporter carrier protein  30.88 
 
 
450 aa  176  7e-43  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.569946  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0715  branched-chain amino acid transport system II carrier protein  32.59 
 
 
438 aa  176  7e-43  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000614247  n/a   
 
 
-
 
NC_005957  BT9727_1751  branched-chain amino acid transport system carrier protein  31.49 
 
 
452 aa  175  9.999999999999999e-43  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  1.04073e-17  n/a   
 
 
-
 
NC_010465  YPK_3273  branched-chain amino acid transport system II carrier protein  29.59 
 
 
439 aa  175  9.999999999999999e-43  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3283  branched-chain amino acid transport system II carrier protein  29.59 
 
 
439 aa  175  9.999999999999999e-43  Yersinia pestis Angola  Bacteria  normal  normal  0.0308168 
 
 
-
 
NC_009708  YpsIP31758_3133  branched-chain amino acid transport system II carrier protein  29.59 
 
 
439 aa  175  9.999999999999999e-43  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2898  branched-chain amino acid transport system carrier protein  30.8 
 
 
450 aa  175  1.9999999999999998e-42  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00345664  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1773  branched-chain amino acid transport system II carrier protein  31.79 
 
 
452 aa  174  2.9999999999999996e-42  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000130057  n/a   
 
 
-
 
NC_006274  BCZK1729  branched-chain amino acid transport system carrier protein  31.26 
 
 
452 aa  174  2.9999999999999996e-42  Bacillus cereus E33L  Bacteria  hitchhiker  0.0000468898  n/a   
 
 
-
 
NC_013421  Pecwa_3298  branched-chain amino acid transport system II carrier protein  30.36 
 
 
439 aa  174  2.9999999999999996e-42  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1012  branched-chain amino acid transport system II carrier protein  29.83 
 
 
439 aa  174  2.9999999999999996e-42  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0892  branched-chain amino acid transport system II carrier protein  30.52 
 
 
443 aa  174  2.9999999999999996e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0108632 
 
 
-
 
NC_010184  BcerKBAB4_4378  branched-chain amino acid transport system II carrier protein  32.71 
 
 
441 aa  173  6.999999999999999e-42  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_2174  branched-chain amino acid transport system II carrier protein  29.3 
 
 
447 aa  172  7.999999999999999e-42  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_1589  branched-chain amino acid transport system II carrier protein  28.1 
 
 
447 aa  172  9e-42  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0804  branched-chain amino acid transport system II carrier protein  31.04 
 
 
448 aa  172  1e-41  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2133  branched-chain amino acid transport system II carrier protein  32.49 
 
 
360 aa  170  3e-41  Bacillus cereus ATCC 10987  Bacteria  normal  0.773417  n/a   
 
 
-
 
CP001637  EcDH1_3208  branched-chain amino acid transport system II carrier protein  28.95 
 
 
439 aa  170  4e-41  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2363  branched-chain amino acid transport system II carrier protein  31.39 
 
 
452 aa  170  4e-41  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00353  hypothetical protein  28.95 
 
 
439 aa  170  4e-41  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0478  branched-chain amino acid transport system II carrier protein  28.95 
 
 
439 aa  170  4e-41  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.709941  normal 
 
 
-
 
NC_010498  EcSMS35_0432  branched-chain amino acid transport system II carrier protein  28.95 
 
 
439 aa  170  4e-41  Escherichia coli SMS-3-5  Bacteria  normal  0.922576  normal 
 
 
-
 
NC_010468  EcolC_3232  branched-chain amino acid transport system II carrier protein  28.95 
 
 
439 aa  170  4e-41  Escherichia coli ATCC 8739  Bacteria  normal  0.686325  unclonable  0.0000000117832 
 
 
-
 
NC_010658  SbBS512_E0320  branched-chain amino acid transport system II carrier protein  28.95 
 
 
439 aa  170  4e-41  Shigella boydii CDC 3083-94  Bacteria  normal  0.259108  n/a   
 
 
-
 
NC_009800  EcHS_A0471  branched-chain amino acid transport system II carrier protein  28.95 
 
 
439 aa  170  4e-41  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
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