179 homologs were found in PanDaTox collection
for query gene Ssed_0892 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009901  Spea_0804  branched-chain amino acid transport system II carrier protein  75.17 
 
 
448 aa  664    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0769  branched-chain amino acid transport system II carrier protein  75.17 
 
 
443 aa  691    Shewanella loihica PV-4  Bacteria  normal  0.949455  normal  0.0746903 
 
 
-
 
NC_010506  Swoo_0894  branched-chain amino acid transport system II carrier protein  87.36 
 
 
449 aa  742    Shewanella woodyi ATCC 51908  Bacteria  normal  0.45318  normal 
 
 
-
 
NC_009831  Ssed_0892  branched-chain amino acid transport system II carrier protein  100 
 
 
443 aa  870    Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0108632 
 
 
-
 
NC_009052  Sbal_0842  branched-chain amino acid transport system II carrier protein  68.18 
 
 
466 aa  605  9.999999999999999e-173  Shewanella baltica OS155  Bacteria  normal  0.809943  n/a   
 
 
-
 
NC_009997  Sbal195_3644  branched-chain amino acid transport system II carrier protein  67.97 
 
 
470 aa  602  1.0000000000000001e-171  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3450  branched-chain amino acid transport system II carrier protein  67.97 
 
 
470 aa  602  1.0000000000000001e-171  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0662  branched-chain amino acid transport system II carrier protein  72.33 
 
 
438 aa  602  1.0000000000000001e-171  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3525  branched-chain amino acid transport system II carrier protein  67.97 
 
 
470 aa  602  1.0000000000000001e-171  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2740  branched-chain amino acid transport system II carrier protein BrnQ  68.74 
 
 
441 aa  597  1e-169  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0746  branched-chain amino acid transport system II carrier protein  70.11 
 
 
442 aa  592  1e-168  Shewanella denitrificans OS217  Bacteria  normal  0.707148  n/a   
 
 
-
 
NC_008577  Shewana3_3332  branched-chain amino acid transport system II carrier protein  68.93 
 
 
467 aa  567  1e-160  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0889  branched-chain amino acid transport system II carrier protein  68.71 
 
 
467 aa  565  1e-160  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0794  branched-chain amino acid transport system II carrier protein  68.56 
 
 
467 aa  563  1.0000000000000001e-159  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3229  branched-chain amino acid transport system II carrier protein  68.56 
 
 
467 aa  563  1.0000000000000001e-159  Shewanella sp. MR-7  Bacteria  normal  0.980889  normal 
 
 
-
 
NC_004347  SO_0949  branched-chain amino acid transport system II carrier protein BrnQ  69.25 
 
 
462 aa  554  1e-156  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_004443  branched-chain amino acid transport system carrier protein  55.23 
 
 
436 aa  462  1e-129  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00954  hypothetical protein  54.28 
 
 
473 aa  455  1e-127  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0193  branched chain amino acid transport system II carrier protein  54.05 
 
 
437 aa  442  1e-123  Vibrio cholerae O395  Bacteria  normal  0.820087  n/a   
 
 
-
 
NC_011312  VSAL_I0560  branched chain amino acid transport system II carrier protein  48.64 
 
 
437 aa  420  1e-116  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43920  branched chain amino acid transporter  46 
 
 
437 aa  362  5.0000000000000005e-99  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3684  branched chain amino acid ABC transporter  45.79 
 
 
548 aa  357  1.9999999999999998e-97  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2498  branched-chain amino acid transport system II carrier protein  45.56 
 
 
437 aa  333  3e-90  Pseudomonas mendocina ymp  Bacteria  normal  0.331302  normal  0.203368 
 
 
-
 
NC_004578  PSPTO_2206  branched-chain amino acid transport system II carrier protein  41.83 
 
 
437 aa  333  4e-90  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_39050  branched-chain amino acid transport carrier  42.56 
 
 
437 aa  333  5e-90  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.379222  normal  0.362487 
 
 
-
 
NC_007005  Psyr_2015  branched chain amino acid ABC transporter carrier protein  43.03 
 
 
437 aa  330  2e-89  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.453737  normal  0.890863 
 
 
-
 
NC_011205  SeD_A0438  branched-chain amino acid transport system II carrier protein  41.39 
 
 
439 aa  330  3e-89  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.54427  normal 
 
 
-
 
NC_011149  SeAg_B0438  branched-chain amino acid transport system II carrier protein  41.16 
 
 
439 aa  329  6e-89  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0457  branched-chain amino acid transport system II carrier protein  41.16 
 
 
439 aa  329  6e-89  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3507  branched-chain amino acid transport system II carrier protein  41.31 
 
 
437 aa  329  6e-89  Pseudomonas putida W619  Bacteria  normal  normal  0.717571 
 
 
-
 
NC_011083  SeHA_C0499  branched-chain amino acid transport system II carrier protein  41.16 
 
 
439 aa  329  6e-89  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0444  branched-chain amino acid transport system II carrier protein  41.16 
 
 
439 aa  329  6e-89  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3325  branched-chain amino acid transport system II carrier protein  42.27 
 
 
437 aa  328  9e-89  Pseudomonas aeruginosa PA7  Bacteria  normal  0.106259  n/a   
 
 
-
 
NC_007492  Pfl01_1619  branched chain amino acid ABC transporter carrier protein  41.18 
 
 
437 aa  328  1.0000000000000001e-88  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.758971  normal  0.0622571 
 
 
-
 
CP001509  ECD_00349  predicted branched chain amino acid transporter (LIV-II)  40.49 
 
 
439 aa  327  2.0000000000000001e-88  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3208  branched-chain amino acid transport system II carrier protein  40.49 
 
 
439 aa  327  2.0000000000000001e-88  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00353  hypothetical protein  40.49 
 
 
439 aa  327  2.0000000000000001e-88  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3232  branched-chain amino acid transport system II carrier protein  40.49 
 
 
439 aa  327  2.0000000000000001e-88  Escherichia coli ATCC 8739  Bacteria  normal  0.686325  unclonable  0.0000000117832 
 
 
-
 
NC_011353  ECH74115_0478  branched-chain amino acid transport system II carrier protein  40.49 
 
 
439 aa  327  2.0000000000000001e-88  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.709941  normal 
 
 
-
 
NC_010498  EcSMS35_0432  branched-chain amino acid transport system II carrier protein  40.49 
 
 
439 aa  328  2.0000000000000001e-88  Escherichia coli SMS-3-5  Bacteria  normal  0.922576  normal 
 
 
-
 
NC_010658  SbBS512_E0320  branched-chain amino acid transport system II carrier protein  40.49 
 
 
439 aa  327  2.0000000000000001e-88  Shigella boydii CDC 3083-94  Bacteria  normal  0.259108  n/a   
 
 
-
 
NC_009800  EcHS_A0471  branched-chain amino acid transport system II carrier protein  40.49 
 
 
439 aa  327  2.0000000000000001e-88  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0431  branched-chain amino acid transport system II carrier protein  40.49 
 
 
439 aa  327  2.0000000000000001e-88  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4184  branched chain amino acid ABC transporter carrier protein  41.53 
 
 
437 aa  327  3e-88  Pseudomonas putida KT2440  Bacteria  normal  0.579709  normal 
 
 
-
 
NC_009512  Pput_1670  branched-chain amino acid transport system II carrier protein  41.53 
 
 
437 aa  326  5e-88  Pseudomonas putida F1  Bacteria  normal  0.129788  normal 
 
 
-
 
NC_010002  Daci_5360  branched-chain amino acid transport system II carrier protein  44.44 
 
 
437 aa  326  6e-88  Delftia acidovorans SPH-1  Bacteria  normal  0.256076  normal 
 
 
-
 
NC_010322  PputGB1_3755  branched-chain amino acid transport system II carrier protein  41.35 
 
 
437 aa  324  2e-87  Pseudomonas putida GB-1  Bacteria  normal  0.642485  normal 
 
 
-
 
NC_012917  PC1_1012  branched-chain amino acid transport system II carrier protein  40.27 
 
 
439 aa  320  3.9999999999999996e-86  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3283  branched-chain amino acid transport system II carrier protein  40.28 
 
 
439 aa  317  4e-85  Yersinia pestis Angola  Bacteria  normal  normal  0.0308168 
 
 
-
 
NC_010465  YPK_3273  branched-chain amino acid transport system II carrier protein  40.28 
 
 
439 aa  316  5e-85  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3133  branched-chain amino acid transport system II carrier protein  40.28 
 
 
439 aa  316  5e-85  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1551  branched-chain amino acid transport system II carrier protein  39.39 
 
 
465 aa  315  7e-85  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.818102  n/a   
 
 
-
 
NC_012912  Dd1591_3102  branched-chain amino acid transport system II carrier protein  40.83 
 
 
440 aa  315  9e-85  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2911  branched-chain amino acid transport system II carrier protein  40.42 
 
 
439 aa  315  9.999999999999999e-85  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1045  branched-chain amino acid transport system II carrier protein  41.44 
 
 
439 aa  314  1.9999999999999998e-84  Serratia proteamaculans 568  Bacteria  normal  0.864553  normal  0.21687 
 
 
-
 
NC_013421  Pecwa_3298  branched-chain amino acid transport system II carrier protein  41.08 
 
 
439 aa  312  6.999999999999999e-84  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2053  branched-chain amino acid transport system II carrier protein  39.47 
 
 
450 aa  311  1e-83  Bacillus cereus B4264  Bacteria  normal  0.087988  n/a   
 
 
-
 
NC_011772  BCG9842_B3254  branched-chain amino acid transport system II carrier protein  38.95 
 
 
450 aa  310  4e-83  Bacillus cereus G9842  Bacteria  normal  0.104949  normal  0.486135 
 
 
-
 
NC_011658  BCAH187_A2163  branched-chain amino acid transport system II carrier protein  39.69 
 
 
450 aa  310  4e-83  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2095  branched-chain amino acid transport system II carrier protein  39.69 
 
 
450 aa  307  3e-82  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A1603  branched-chain amino acid transport system II carrier protein  43.41 
 
 
451 aa  306  4.0000000000000004e-82  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000188549  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1913  branched-chain amino acid transport system II carrier protein  39.25 
 
 
450 aa  306  5.0000000000000004e-82  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0827616  n/a   
 
 
-
 
NC_009832  Spro_3953  branched-chain amino acid transport system II carrier protein  38.88 
 
 
439 aa  306  5.0000000000000004e-82  Serratia proteamaculans 568  Bacteria  normal  0.726579  normal 
 
 
-
 
NC_005945  BAS1916  branched-chain amino acid transport system II carrier protein  39.51 
 
 
448 aa  306  6e-82  Bacillus anthracis str. Sterne  Bacteria  normal  0.377142  n/a   
 
 
-
 
NC_007530  GBAA_2063  branched chain amino acid ABC transporter carrier protein  39.51 
 
 
445 aa  306  6e-82  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1878  branched-chain amino acid transport system carrier protein  39.29 
 
 
448 aa  305  7e-82  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.343185  n/a   
 
 
-
 
NC_013457  VEA_000813  branched-chain amino acid transport system carrier protein  41.4 
 
 
436 aa  303  3.0000000000000004e-81  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1869  branched-chain amino acid transport system carrier protein  39.29 
 
 
448 aa  303  3.0000000000000004e-81  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06721  hypothetical protein  40.96 
 
 
436 aa  302  7.000000000000001e-81  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009436  Ent638_0869  branched-chain amino acid transport system II carrier protein  39.59 
 
 
439 aa  301  1e-80  Enterobacter sp. 638  Bacteria  normal  0.978124  normal 
 
 
-
 
NC_006274  BCZK1323  branched-chain amino acid transport protein  42.89 
 
 
451 aa  300  2e-80  Bacillus cereus E33L  Bacteria  decreased coverage  0.00120773  n/a   
 
 
-
 
NC_011773  BCAH820_1533  branched-chain amino acid transport system II carrier protein  42.89 
 
 
451 aa  301  2e-80  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.93507e-19 
 
 
-
 
NC_005957  BT9727_1324  branched-chain amino acid transport protein  42.89 
 
 
451 aa  300  3e-80  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000000172075  n/a   
 
 
-
 
NC_011725  BCB4264_A1497  branched-chain amino acid transport system II carrier protein  43.44 
 
 
451 aa  298  2e-79  Bacillus cereus B4264  Bacteria  unclonable  0.0000870089  n/a   
 
 
-
 
NC_005945  BAS1350  branched-chain amino acid transport system II carrier protein  42.66 
 
 
451 aa  298  2e-79  Bacillus anthracis str. Sterne  Bacteria  normal  0.0128918  n/a   
 
 
-
 
NC_005957  BT9727_1751  branched-chain amino acid transport system carrier protein  42.24 
 
 
452 aa  297  2e-79  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  1.04073e-17  n/a   
 
 
-
 
NC_007530  GBAA_1459  branched chain amino acid ABC transporter carrier protein  42.66 
 
 
451 aa  298  2e-79  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.210353  n/a   
 
 
-
 
NC_003909  BCE_1565  branched-chain amino acid transport system II carrier protein  43.12 
 
 
451 aa  297  3e-79  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00000310033  n/a   
 
 
-
 
NC_006274  BCZK1729  branched-chain amino acid transport system carrier protein  42.24 
 
 
452 aa  297  3e-79  Bacillus cereus E33L  Bacteria  hitchhiker  0.0000468898  n/a   
 
 
-
 
NC_009674  Bcer98_1161  branched-chain amino acid transport system II carrier protein  41.28 
 
 
451 aa  296  3e-79  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.328055  n/a   
 
 
-
 
NC_011772  BCG9842_B3847  branched-chain amino acid transport system II carrier protein  43.2 
 
 
448 aa  296  5e-79  Bacillus cereus G9842  Bacteria  hitchhiker  0.00000203183  hitchhiker  0.00000000239284 
 
 
-
 
NC_010184  BcerKBAB4_1365  branched-chain amino acid transport system II carrier protein  43.81 
 
 
451 aa  295  7e-79  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00132143  n/a   
 
 
-
 
NC_011773  BCAH820_3153  branched-chain amino acid transport system II carrier protein  40.57 
 
 
450 aa  291  1e-77  Bacillus cereus AH820  Bacteria  n/a    normal  0.611345 
 
 
-
 
NC_005945  BAS2920  branched-chain amino acid transport system II carrier protein  40.57 
 
 
450 aa  291  2e-77  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3142  branched chain amino acid ABC transporter carrier protein  40.57 
 
 
450 aa  291  2e-77  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.569946  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1773  branched-chain amino acid transport system II carrier protein  41 
 
 
452 aa  288  1e-76  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000130057  n/a   
 
 
-
 
NC_011773  BCAH820_1945  branched-chain amino acid transport system II carrier protein  41.77 
 
 
452 aa  287  2e-76  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.15478e-28 
 
 
-
 
NC_012793  GWCH70_3188  branched-chain amino acid transport system II carrier protein  40.28 
 
 
436 aa  281  1e-74  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.00000000414074  n/a   
 
 
-
 
NC_003909  BCE_2133  branched-chain amino acid transport system II carrier protein  42.54 
 
 
360 aa  281  2e-74  Bacillus cereus ATCC 10987  Bacteria  normal  0.773417  n/a   
 
 
-
 
NC_005957  BT9727_2898  branched-chain amino acid transport system carrier protein  39.62 
 
 
450 aa  279  7e-74  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00345664  n/a   
 
 
-
 
NC_011312  VSAL_I1220  branched chain amino acid transport system II carrier protein  37.95 
 
 
432 aa  278  1e-73  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.468414  n/a   
 
 
-
 
NC_003909  BCE_1994  branched-chain amino acid transport system II carrier protein  39.71 
 
 
452 aa  278  2e-73  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000216802  n/a   
 
 
-
 
NC_011658  BCAH187_A2016  branched-chain amino acid transport system II carrier protein  39.71 
 
 
452 aa  278  2e-73  Bacillus cereus AH187  Bacteria  unclonable  0.0000000186213  n/a   
 
 
-
 
NC_011772  BCG9842_B3429  branched-chain amino acid transport system II carrier protein  40.19 
 
 
452 aa  276  6e-73  Bacillus cereus G9842  Bacteria  hitchhiker  0.000169589  hitchhiker  0.000000128434 
 
 
-
 
NC_011725  BCB4264_A1915  branched-chain amino acid transport system II carrier protein  40.19 
 
 
452 aa  276  7e-73  Bacillus cereus B4264  Bacteria  normal  0.0189448  n/a   
 
 
-
 
NC_008261  CPF_0392  branched-chain amino acid transport system II carrier protein  38.8 
 
 
445 aa  275  2.0000000000000002e-72  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0388  branched-chain amino acid transport system II carrier protein  38.73 
 
 
445 aa  273  3e-72  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0999  branched-chain amino acid transport system II carrier protein  38.48 
 
 
438 aa  273  5.000000000000001e-72  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0700  branched-chain amino acid transport protein  37.76 
 
 
438 aa  271  1e-71  Bacillus cereus E33L  Bacteria  hitchhiker  0.000173599  n/a   
 
 
-
 
NC_011658  BCAH187_A0966  branched-chain amino acid transport system II carrier protein  37.36 
 
 
438 aa  270  2.9999999999999997e-71  Bacillus cereus AH187  Bacteria  unclonable  0.0000000062732  n/a   
 
 
-
 
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