| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0794 |
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| Symbol | |
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| ID | 4250638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 928383 |
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| End bp | 929786 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117357 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_732931 |
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| Protein GI | 113969138 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGACA ATCAGATGAG TATCGGGGAT ACATTAGGCT TAGGTTTTAT GACCTTTGCA
TTTTTTTTGG GGGCGGGTAA CTTAATTTTT CCACCCTTTG CGGGTATGTT GGCCGGGGAG
AATATGTTCC TTGCCATGTT AGGTTTTCTC ATCACTGCCG TAGGTTTACC TTTAGTCGGG
CTCATTGCTG TTGCTAAGGC TCAAGGTAAG GTTATGGCAA TGCTGCCAGT GTTTGCGGCA
ACCGCATTGG CCATCGCGAT TTATATCATT ATTGGGCCCG CGTTTGCGGC GCCACGTACC
GGCCTTGTGG CCTATGAAAT CGGTGCAAAG CCCTTTATCG ATAACACGAC TGCGACCATT
ATGCTCGGCA ATTTATCGCT TAATTTGTCG CAGTTAATCT ATACCCTGTG CTTCTTTACC
GTGACTATGC TACTGGCATT GTTCCCCGGT AAATTACTCG ACAGCGTCGG TAAAGTATTA
ACGCCTATCC TATTGTTATT GCTGGTAGGT TTAGCCTTAT CTGTGGTGTT TTTACCCGCA
GCAGATGTAG GTGTGGCCGT GGGTGACTAC CAAAACCATC CGCTGACCAA AGGTATCCTC
GAAGGCTACA ACACCATGGA TACCCTAGCG TCGTTGATGT TTGGTATGTT GATTATCGAT
CTGCTGCGTA AAAAGGGGAT CGACCAACCT AGCGCGCAGA CTAAATACTT GATCCGTGCA
GCCTTTATTG CGGCGGCAGG TCTGGCATTT GTTTATGTGT CTCTGTTCTT TTTAGGTGCG
ACGGCGGGTG ATATTGCCGT AGGTGCTAAA AACGGTGGCG AGATTTTAAC TAACTATGTG
ACACGTGAGT TTGGCAGTTT AGGCGCGGTA TTACTGTCTA CCGTTGTGAC CTTAGCCTGT
TTAACCACGG CGGTCGGTTT AGTGAGTGCC TGCTCAGAGT TTTTCAATGA GTTGATGCCA
AAGCTGTCTT ACCGTTTCTT GGTGGTTGTA CTCAGCGCTA TCTGTGCCTT GATTGCGAAC
GTGGGGCTGT CTCAGCTGAT CGCTATCAGT ATTCCTGTGT TGATGGCAGT TTACCCTGTG
GCTATTACCT TAGTGGCGGT AACTTTCTTG ACCGAATACT TCCCGCGTCC ACAGTTTGCT
CACCGTGCTG CACTGTCTGT GGCACTGCTG TTTGGTATTT TCGATGGGAT GAAAGTCGCG
GCGAAAGGCC TCACAGGTGA AGACGGTAAA GGCATCACCG AAGCGGCGCA GAGCTTTATC
GATATGGTGA GTGGTATGTC TCCCACACTG TCGATTTTAC CTCTGTATGA AGAGGGGATG
GCGTGGTTAC TGCCAACCTT AGTCGTGATC GTGCTGTGTT TATTGTTTGG CCGCGGTGGT
GCGAAAGCGG TCAGCGCGGC ATAA
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| Protein sequence | MQDNQMSIGD TLGLGFMTFA FFLGAGNLIF PPFAGMLAGE NMFLAMLGFL ITAVGLPLVG
LIAVAKAQGK VMAMLPVFAA TALAIAIYII IGPAFAAPRT GLVAYEIGAK PFIDNTTATI
MLGNLSLNLS QLIYTLCFFT VTMLLALFPG KLLDSVGKVL TPILLLLLVG LALSVVFLPA
ADVGVAVGDY QNHPLTKGIL EGYNTMDTLA SLMFGMLIID LLRKKGIDQP SAQTKYLIRA
AFIAAAGLAF VYVSLFFLGA TAGDIAVGAK NGGEILTNYV TREFGSLGAV LLSTVVTLAC
LTTAVGLVSA CSEFFNELMP KLSYRFLVVV LSAICALIAN VGLSQLIAIS IPVLMAVYPV
AITLVAVTFL TEYFPRPQFA HRAALSVALL FGIFDGMKVA AKGLTGEDGK GITEAAQSFI
DMVSGMSPTL SILPLYEEGM AWLLPTLVVI VLCLLFGRGG AKAVSAA
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