| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1220 |
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| Symbol | braB |
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| ID | 6986908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1326995 |
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| End bp | 1328293 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643379593 |
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| Product | branched chain amino acid transport system II carrier protein |
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| Protein accession | YP_002262692 |
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| Protein GI | 209694764 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.468414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAAAAC ACAACTTGCT TGCGATTGGT CTAATGACGT TTGCCATGTT CCTTGGTGCA
GGAAACATCA TATTCCCTCC TTTTCTTGGC CTTGAAGCAG GCACTCAATT TCTCCCTGCA
ATGCTCGGCT TTTTACTTAC CGCGGTTGGA CTTCCAGCAT TAACGCTGAT TGTTTTAGGG
CGACTGAGTA ACAGTGGTCA ACTAACTCAA GCGTTACCGA AACCATTGGC GATTGCTTTT
TGGGTATTAC TTTTTATTGC AATTGGTCCT GCCTTCGGGA TGCCACGAGC AGTAACGGTT
GCGTATGAAA TGGGGATTAA GCCCTTCTTT ACCGGTGACC ACCTAATGCT TTTCTCGGTT
ATGTTTGTGG GAGCTACGTT ATTGTTGGCT TTCCAAAGAG GTAAGTTGGT GGATTACATT
GGTAAAGTCA TGACGCCACT GCTTGTTCTT ATGCTAGCCG CGTTAGCGTT AGCGGCCATT
ATTACGCCAT TAGGTGTTCT TGGTGAGCCG AGTGCCAGTT ATCAGCATAA AGCCATCACA
AGCGGTTTGA TCCAAGGTTA CATGACAATG GATGCGATTG CGGCTGTTGG ATTTGGTTGG
GTCATCATTA AAGCCATTCG TGATAAAGGG TGTGAATCAC CAAAAGATGT TTTTCAAGCA
ACGCTTAAAG TAACGTTGAT TTATGCGCTG CTAATGTCGG CGTGTTATTT AGCCATGGCT
TATGTTGGTG CGACATCAAC GTCTATTGCT GAAGGCGCAA CTAATGGTGG TGAATTACTA
ACGCGTTATG TTGCTGAGAT ATTTGGACCA CTAGGTCAAT ACTTATTAGC AGGTATTATT
ATTATGGCGT GTTTAACGAC GACGGTAGGG TTGACGAATG CATGTGCTGA GTACAGCCAA
CAAACGTTCC GCACTCCGTT TGCGATTACC GCGATTATCG TTACAGCGAT GACAGGCGTT
GTTGCTAACT TCGGATTAGA GCAAATCTTG GCTATCAGCT TACCTGCTAT ACTCATATTA
TGTCCGGTAG CGATTGCTTT AGTATTAGCG GCGTGGTTTT TACCTACGAC AAAACACAAT
ACTATTTCAT ACGTTAGTGT TGTGATGATT AGCGTTGTAT TTGGTGGGTT AGATGCACTG
CATATTTTGG GTTTATTGTC TGATTCTTTA TCTGCATCAT TAACTCATTA TATTCCTCTC
TTTTCGGCTC ATGCGAGTTG GTTTTTACCT GTAGTGATAA CTGTATTTAT TAGTCTATTA
CTAAACCGAA AATCGAGTGC ATTAGAGTCA TCGAACTAA
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| Protein sequence | MKKHNLLAIG LMTFAMFLGA GNIIFPPFLG LEAGTQFLPA MLGFLLTAVG LPALTLIVLG
RLSNSGQLTQ ALPKPLAIAF WVLLFIAIGP AFGMPRAVTV AYEMGIKPFF TGDHLMLFSV
MFVGATLLLA FQRGKLVDYI GKVMTPLLVL MLAALALAAI ITPLGVLGEP SASYQHKAIT
SGLIQGYMTM DAIAAVGFGW VIIKAIRDKG CESPKDVFQA TLKVTLIYAL LMSACYLAMA
YVGATSTSIA EGATNGGELL TRYVAEIFGP LGQYLLAGII IMACLTTTVG LTNACAEYSQ
QTFRTPFAIT AIIVTAMTGV VANFGLEQIL AISLPAILIL CPVAIALVLA AWFLPTTKHN
TISYVSVVMI SVVFGGLDAL HILGLLSDSL SASLTHYIPL FSAHASWFLP VVITVFISLL
LNRKSSALES SN
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