179 homologs were found in PanDaTox collection
for query gene VSAL_I1220 on replicon NC_011312
Organism: Aliivibrio salmonicida LFI1238



Page 1 of 2    << first  < prev  1  2    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011312  VSAL_I1220  branched chain amino acid transport system II carrier protein  100 
 
 
432 aa  855    Aliivibrio salmonicida LFI1238  Bacteria  normal  0.468414  n/a   
 
 
-
 
NC_011313  VSAL_II0999  branched-chain amino acid transport system II carrier protein  54.61 
 
 
438 aa  439  9.999999999999999e-123  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000813  branched-chain amino acid transport system carrier protein  43.98 
 
 
436 aa  372  1e-101  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06721  hypothetical protein  43.42 
 
 
436 aa  362  6e-99  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I0560  branched chain amino acid transport system II carrier protein  38.67 
 
 
437 aa  296  4e-79  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2740  branched-chain amino acid transport system II carrier protein BrnQ  38.46 
 
 
441 aa  294  2e-78  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00954  hypothetical protein  39.26 
 
 
473 aa  292  8e-78  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_43920  branched chain amino acid transporter  40 
 
 
437 aa  286  5e-76  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_004443  branched-chain amino acid transport system carrier protein  39.61 
 
 
436 aa  285  1.0000000000000001e-75  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0769  branched-chain amino acid transport system II carrier protein  38.48 
 
 
443 aa  285  1.0000000000000001e-75  Shewanella loihica PV-4  Bacteria  normal  0.949455  normal  0.0746903 
 
 
-
 
NC_007954  Sden_0746  branched-chain amino acid transport system II carrier protein  36.71 
 
 
442 aa  284  2.0000000000000002e-75  Shewanella denitrificans OS217  Bacteria  normal  0.707148  n/a   
 
 
-
 
NC_009656  PSPA7_3684  branched chain amino acid ABC transporter  39.58 
 
 
548 aa  284  3.0000000000000004e-75  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0892  branched-chain amino acid transport system II carrier protein  38.18 
 
 
443 aa  281  2e-74  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0108632 
 
 
-
 
NC_012793  GWCH70_3188  branched-chain amino acid transport system II carrier protein  37.76 
 
 
436 aa  280  3e-74  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.00000000414074  n/a   
 
 
-
 
NC_009901  Spea_0804  branched-chain amino acid transport system II carrier protein  37.53 
 
 
448 aa  278  1e-73  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0193  branched chain amino acid transport system II carrier protein  39.86 
 
 
437 aa  275  1.0000000000000001e-72  Vibrio cholerae O395  Bacteria  normal  0.820087  n/a   
 
 
-
 
NC_009052  Sbal_0842  branched-chain amino acid transport system II carrier protein  36.04 
 
 
466 aa  274  2.0000000000000002e-72  Shewanella baltica OS155  Bacteria  normal  0.809943  n/a   
 
 
-
 
NC_010506  Swoo_0894  branched-chain amino acid transport system II carrier protein  38.44 
 
 
449 aa  274  2.0000000000000002e-72  Shewanella woodyi ATCC 51908  Bacteria  normal  0.45318  normal 
 
 
-
 
NC_011663  Sbal223_3450  branched-chain amino acid transport system II carrier protein  36.04 
 
 
470 aa  273  3e-72  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B3254  branched-chain amino acid transport system II carrier protein  37.78 
 
 
450 aa  272  9e-72  Bacillus cereus G9842  Bacteria  normal  0.104949  normal  0.486135 
 
 
-
 
NC_011725  BCB4264_A2053  branched-chain amino acid transport system II carrier protein  37.44 
 
 
450 aa  271  1e-71  Bacillus cereus B4264  Bacteria  normal  0.087988  n/a   
 
 
-
 
NC_009997  Sbal195_3644  branched-chain amino acid transport system II carrier protein  35.82 
 
 
470 aa  271  1e-71  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3525  branched-chain amino acid transport system II carrier protein  35.82 
 
 
470 aa  271  1e-71  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2163  branched-chain amino acid transport system II carrier protein  36.76 
 
 
450 aa  271  2e-71  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1161  branched-chain amino acid transport system II carrier protein  39.14 
 
 
451 aa  270  4e-71  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.328055  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1913  branched-chain amino acid transport system II carrier protein  38.39 
 
 
450 aa  269  8.999999999999999e-71  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0827616  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1365  branched-chain amino acid transport system II carrier protein  40.46 
 
 
451 aa  268  1e-70  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00132143  n/a   
 
 
-
 
NC_009674  Bcer98_1551  branched-chain amino acid transport system II carrier protein  36.55 
 
 
465 aa  268  2e-70  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.818102  n/a   
 
 
-
 
NC_011773  BCAH820_1533  branched-chain amino acid transport system II carrier protein  40.69 
 
 
451 aa  266  4e-70  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.93507e-19 
 
 
-
 
NC_006274  BCZK1323  branched-chain amino acid transport protein  40.69 
 
 
451 aa  266  4e-70  Bacillus cereus E33L  Bacteria  decreased coverage  0.00120773  n/a   
 
 
-
 
NC_011725  BCB4264_A1497  branched-chain amino acid transport system II carrier protein  40.74 
 
 
451 aa  266  5e-70  Bacillus cereus B4264  Bacteria  unclonable  0.0000870089  n/a   
 
 
-
 
NC_005945  BAS2920  branched-chain amino acid transport system II carrier protein  35.78 
 
 
450 aa  266  5e-70  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3142  branched chain amino acid ABC transporter carrier protein  35.78 
 
 
450 aa  266  5e-70  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.569946  n/a   
 
 
-
 
NC_005957  BT9727_1324  branched-chain amino acid transport protein  40.69 
 
 
451 aa  266  5.999999999999999e-70  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000000172075  n/a   
 
 
-
 
NC_011773  BCAH820_3153  branched-chain amino acid transport system II carrier protein  35.55 
 
 
450 aa  266  7e-70  Bacillus cereus AH820  Bacteria  n/a    normal  0.611345 
 
 
-
 
NC_005945  BAS1350  branched-chain amino acid transport system II carrier protein  40.69 
 
 
451 aa  265  8.999999999999999e-70  Bacillus anthracis str. Sterne  Bacteria  normal  0.0128918  n/a   
 
 
-
 
NC_007530  GBAA_1459  branched chain amino acid ABC transporter carrier protein  40.69 
 
 
451 aa  265  8.999999999999999e-70  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.210353  n/a   
 
 
-
 
NC_011658  BCAH187_A1603  branched-chain amino acid transport system II carrier protein  40.23 
 
 
451 aa  263  4e-69  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000188549  n/a   
 
 
-
 
NC_011772  BCG9842_B3847  branched-chain amino acid transport system II carrier protein  39.4 
 
 
448 aa  263  6e-69  Bacillus cereus G9842  Bacteria  hitchhiker  0.00000203183  hitchhiker  0.00000000239284 
 
 
-
 
NC_005945  BAS1916  branched-chain amino acid transport system II carrier protein  37.21 
 
 
448 aa  261  1e-68  Bacillus anthracis str. Sterne  Bacteria  normal  0.377142  n/a   
 
 
-
 
NC_011773  BCAH820_2095  branched-chain amino acid transport system II carrier protein  36.99 
 
 
450 aa  261  1e-68  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_39050  branched-chain amino acid transport carrier  37.53 
 
 
437 aa  262  1e-68  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.379222  normal  0.362487 
 
 
-
 
NC_005957  BT9727_1878  branched-chain amino acid transport system carrier protein  37.44 
 
 
448 aa  261  2e-68  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.343185  n/a   
 
 
-
 
NC_007530  GBAA_2063  branched chain amino acid ABC transporter carrier protein  37.21 
 
 
445 aa  261  2e-68  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1565  branched-chain amino acid transport system II carrier protein  40 
 
 
451 aa  260  3e-68  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00000310033  n/a   
 
 
-
 
NC_010498  EcSMS35_0432  branched-chain amino acid transport system II carrier protein  36.14 
 
 
439 aa  260  3e-68  Escherichia coli SMS-3-5  Bacteria  normal  0.922576  normal 
 
 
-
 
CP001509  ECD_00349  predicted branched chain amino acid transporter (LIV-II)  35.91 
 
 
439 aa  260  4e-68  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3208  branched-chain amino acid transport system II carrier protein  35.91 
 
 
439 aa  260  4e-68  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0438  branched-chain amino acid transport system II carrier protein  35.24 
 
 
439 aa  260  4e-68  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0320  branched-chain amino acid transport system II carrier protein  35.91 
 
 
439 aa  260  4e-68  Shigella boydii CDC 3083-94  Bacteria  normal  0.259108  n/a   
 
 
-
 
NC_010468  EcolC_3232  branched-chain amino acid transport system II carrier protein  35.91 
 
 
439 aa  260  4e-68  Escherichia coli ATCC 8739  Bacteria  normal  0.686325  unclonable  0.0000000117832 
 
 
-
 
NC_006274  BCZK1869  branched-chain amino acid transport system carrier protein  36.73 
 
 
448 aa  260  4e-68  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00353  hypothetical protein  35.91 
 
 
439 aa  260  4e-68  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0478  branched-chain amino acid transport system II carrier protein  35.91 
 
 
439 aa  260  4e-68  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.709941  normal 
 
 
-
 
NC_009800  EcHS_A0471  branched-chain amino acid transport system II carrier protein  35.91 
 
 
439 aa  260  4e-68  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0431  branched-chain amino acid transport system II carrier protein  35.91 
 
 
439 aa  260  4e-68  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0438  branched-chain amino acid transport system II carrier protein  35.01 
 
 
439 aa  259  5.0000000000000005e-68  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.54427  normal 
 
 
-
 
NC_011080  SNSL254_A0444  branched-chain amino acid transport system II carrier protein  35.01 
 
 
439 aa  259  6e-68  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0499  branched-chain amino acid transport system II carrier protein  35.01 
 
 
439 aa  259  6e-68  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0457  branched-chain amino acid transport system II carrier protein  35.01 
 
 
439 aa  259  6e-68  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1619  branched chain amino acid ABC transporter carrier protein  37.82 
 
 
437 aa  258  2e-67  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.758971  normal  0.0622571 
 
 
-
 
NC_009656  PSPA7_3325  branched-chain amino acid transport system II carrier protein  37.91 
 
 
437 aa  258  2e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  0.106259  n/a   
 
 
-
 
NC_009439  Pmen_2498  branched-chain amino acid transport system II carrier protein  41.93 
 
 
437 aa  257  3e-67  Pseudomonas mendocina ymp  Bacteria  normal  0.331302  normal  0.203368 
 
 
-
 
NC_004578  PSPTO_2206  branched-chain amino acid transport system II carrier protein  36.7 
 
 
437 aa  257  4e-67  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0662  branched-chain amino acid transport system II carrier protein  35.73 
 
 
438 aa  255  1.0000000000000001e-66  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3507  branched-chain amino acid transport system II carrier protein  36.16 
 
 
437 aa  253  5.000000000000001e-66  Pseudomonas putida W619  Bacteria  normal  normal  0.717571 
 
 
-
 
NC_005957  BT9727_2898  branched-chain amino acid transport system carrier protein  34.17 
 
 
450 aa  253  6e-66  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00345664  n/a   
 
 
-
 
NC_007005  Psyr_2015  branched chain amino acid ABC transporter carrier protein  37.23 
 
 
437 aa  252  9.000000000000001e-66  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.453737  normal  0.890863 
 
 
-
 
NC_010159  YpAngola_A3283  branched-chain amino acid transport system II carrier protein  35.83 
 
 
439 aa  251  1e-65  Yersinia pestis Angola  Bacteria  normal  normal  0.0308168 
 
 
-
 
NC_010465  YPK_3273  branched-chain amino acid transport system II carrier protein  35.83 
 
 
439 aa  251  2e-65  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3133  branched-chain amino acid transport system II carrier protein  35.83 
 
 
439 aa  251  2e-65  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2133  branched-chain amino acid transport system II carrier protein  40.46 
 
 
360 aa  250  3e-65  Bacillus cereus ATCC 10987  Bacteria  normal  0.773417  n/a   
 
 
-
 
NC_010322  PputGB1_3755  branched-chain amino acid transport system II carrier protein  35.93 
 
 
437 aa  250  3e-65  Pseudomonas putida GB-1  Bacteria  normal  0.642485  normal 
 
 
-
 
NC_009512  Pput_1670  branched-chain amino acid transport system II carrier protein  35.7 
 
 
437 aa  249  7e-65  Pseudomonas putida F1  Bacteria  normal  0.129788  normal 
 
 
-
 
NC_002947  PP_4184  branched chain amino acid ABC transporter carrier protein  35.7 
 
 
437 aa  249  9e-65  Pseudomonas putida KT2440  Bacteria  normal  0.579709  normal 
 
 
-
 
NC_009436  Ent638_0869  branched-chain amino acid transport system II carrier protein  34.17 
 
 
439 aa  249  1e-64  Enterobacter sp. 638  Bacteria  normal  0.978124  normal 
 
 
-
 
NC_010184  BcerKBAB4_1773  branched-chain amino acid transport system II carrier protein  34.94 
 
 
452 aa  248  2e-64  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000130057  n/a   
 
 
-
 
NC_005957  BT9727_1751  branched-chain amino acid transport system carrier protein  34.94 
 
 
452 aa  246  4e-64  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  1.04073e-17  n/a   
 
 
-
 
NC_008322  Shewmr7_3229  branched-chain amino acid transport system II carrier protein  35.53 
 
 
467 aa  247  4e-64  Shewanella sp. MR-7  Bacteria  normal  0.980889  normal 
 
 
-
 
NC_008321  Shewmr4_0794  branched-chain amino acid transport system II carrier protein  35.53 
 
 
467 aa  246  4.9999999999999997e-64  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1729  branched-chain amino acid transport system carrier protein  34.94 
 
 
452 aa  245  9.999999999999999e-64  Bacillus cereus E33L  Bacteria  hitchhiker  0.0000468898  n/a   
 
 
-
 
NC_008577  Shewana3_3332  branched-chain amino acid transport system II carrier protein  35.95 
 
 
467 aa  245  9.999999999999999e-64  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0949  branched-chain amino acid transport system II carrier protein BrnQ  35.29 
 
 
462 aa  243  3.9999999999999997e-63  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_1012  branched-chain amino acid transport system II carrier protein  32.64 
 
 
439 aa  240  2.9999999999999997e-62  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0889  branched-chain amino acid transport system II carrier protein  34.8 
 
 
467 aa  240  2.9999999999999997e-62  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2911  branched-chain amino acid transport system II carrier protein  35.76 
 
 
439 aa  239  5.999999999999999e-62  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0388  branched-chain amino acid transport system II carrier protein  35.51 
 
 
445 aa  238  1e-61  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1915  branched-chain amino acid transport system II carrier protein  34.92 
 
 
452 aa  238  2e-61  Bacillus cereus B4264  Bacteria  normal  0.0189448  n/a   
 
 
-
 
NC_008261  CPF_0392  branched-chain amino acid transport system II carrier protein  35.75 
 
 
445 aa  238  2e-61  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3102  branched-chain amino acid transport system II carrier protein  32.64 
 
 
440 aa  237  4e-61  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0722  branched-chain amino acid transport system II carrier protein  33.72 
 
 
433 aa  236  7e-61  Bacillus cereus B4264  Bacteria  unclonable  0.0000954192  n/a   
 
 
-
 
NC_010002  Daci_5360  branched-chain amino acid transport system II carrier protein  38.14 
 
 
437 aa  236  7e-61  Delftia acidovorans SPH-1  Bacteria  normal  0.256076  normal 
 
 
-
 
NC_011773  BCAH820_1945  branched-chain amino acid transport system II carrier protein  34.7 
 
 
452 aa  236  7e-61  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.15478e-28 
 
 
-
 
NC_011772  BCG9842_B3429  branched-chain amino acid transport system II carrier protein  34.78 
 
 
452 aa  235  1.0000000000000001e-60  Bacillus cereus G9842  Bacteria  hitchhiker  0.000169589  hitchhiker  0.000000128434 
 
 
-
 
NC_003909  BCE_1994  branched-chain amino acid transport system II carrier protein  34.78 
 
 
452 aa  234  2.0000000000000002e-60  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000216802  n/a   
 
 
-
 
NC_013421  Pecwa_3298  branched-chain amino acid transport system II carrier protein  32.87 
 
 
439 aa  234  2.0000000000000002e-60  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2016  branched-chain amino acid transport system II carrier protein  34.54 
 
 
452 aa  234  3e-60  Bacillus cereus AH187  Bacteria  unclonable  0.0000000186213  n/a   
 
 
-
 
NC_009832  Spro_1045  branched-chain amino acid transport system II carrier protein  33.18 
 
 
439 aa  233  4.0000000000000004e-60  Serratia proteamaculans 568  Bacteria  normal  0.864553  normal  0.21687 
 
 
-
 
NC_011772  BCG9842_B4613  branched-chain amino acid transport system II carrier protein  33.03 
 
 
431 aa  233  5e-60  Bacillus cereus G9842  Bacteria  hitchhiker  0.00164861  normal  0.198827 
 
 
-
 
NC_009674  Bcer98_0582  branched-chain amino acid transport system II carrier protein  33.56 
 
 
431 aa  232  1e-59  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.175279  n/a   
 
 
-
 
Page 1 of 2    << first  < prev  1  2    next >  last >>