| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1670 |
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| Symbol | |
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| ID | 5194637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1876771 |
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| End bp | 1878084 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586140 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_001267010 |
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| Protein GI | 148546908 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.129788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTC TCAAAGGCCA GGATATCCTG GCGCTTGGCT TTATGACGTT TGCGCTTTTC
GTGGGTGCAG GCAATATCAT CTTCCCGCCT ATCGTCGGTC TGCAGTCTGG CCCGCATGTA
TGGATGGCTG CACTGGGCTT CCTGGTGACT GCCGTCGGCC TGCCGGTCAT CACCGTGGTC
GCCCTGGCCA AGGTCGGTGG CGGCATGGAT GCCCTGAGCA GCCCGATCGG CAAGTTCTTC
GGTGGCTTGC TGGCTGCTGT GTGCTACCTG TCGGTAGGCC CACTGTTCGC CACCCCGCGT
ACCGCGACCG TGTCGTTCGA AGTGGGCGTT GCACCGCTGA CCGGTGAAAG CCCGCTGGCG
CTGTTCATCT ACAGCCTGGT GTACTTCATC GTCGTGCTGG CCGTGTCCAT GTACCCTGGC
AAGTTGCTCG ACACCGTGGG CCGCTTCCTG GCACCGTTGA AGATCATTGC CCTGGCCGTA
CTGGGCATCG CTGCCTTCGC CTTGCCCGCC GGTACCATCG GTGACGCACA GCCTGCCTAT
GCCGCCGCTG CGTTCTCAAA GGGCTTCTCC GATGGCTACC TGACCATGGA TACCCTGGGT
GCCCTGGTGT TCGGTATCGT CATTGTCAAT GCCATTCGCT CGCGCGGTGT CGAGTCGCCG
AGGCTGATTA CCCGCTACGC CATCATCGCC GGCCTGATCG CCGGTGTCGG CCTGGCCCTG
GTTTACATCA GCCTGTTCCG CCTGGGTGCC ACCAGCCACG ACATCGCGGC GGACGCCACC
AACGGTGCGG CGGTGCTGCA TGCCTACGTA CAGCACACCT TCGGCTCCCT GGGCAGCGGC
TTCCTGGCCG TGCTGATCGC GCTGGCCTGC CTGGTGACCG CGGTTGGCCT GACCTGTGCC
TGCGCCGAGT ACTTCAGCCA GATCCTGCCG CTGTCGTACC GCGCGCTGGT GGTGATCCTC
GCCGGCTTCT CGCTGCTGAT TTCCAACCTT GGCCTGACCA AGCTGATCAT GTTCTCGATC
CCGGTGCTCA CCGCCATCTA TCCGCCGTGC ATCGTGGTGG TTGGCCTGAG CTTCGTGAAA
GACCTGTGGA ACTCGCCAAC GCGCATCCTG GCACCGGTGA TGCTGGTGTC GCTGTTGTTC
GGCATGGTCG ATGCGATCAA GGGCAGCAGC CTTGCCCACG TGTTGCCAGA CTTCATGGCG
CACCTGCCAT TGAGTGATGC CGGCATGGCC TGGCTGGTAC CTTCGGTGGT GACCCTGGTG
GGTGCCGTGG CCTGCGACCG CATGCTCGGC AAGCCGCGCG AGGCGCTGGC CTGA
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| Protein sequence | MKVLKGQDIL ALGFMTFALF VGAGNIIFPP IVGLQSGPHV WMAALGFLVT AVGLPVITVV
ALAKVGGGMD ALSSPIGKFF GGLLAAVCYL SVGPLFATPR TATVSFEVGV APLTGESPLA
LFIYSLVYFI VVLAVSMYPG KLLDTVGRFL APLKIIALAV LGIAAFALPA GTIGDAQPAY
AAAAFSKGFS DGYLTMDTLG ALVFGIVIVN AIRSRGVESP RLITRYAIIA GLIAGVGLAL
VYISLFRLGA TSHDIAADAT NGAAVLHAYV QHTFGSLGSG FLAVLIALAC LVTAVGLTCA
CAEYFSQILP LSYRALVVIL AGFSLLISNL GLTKLIMFSI PVLTAIYPPC IVVVGLSFVK
DLWNSPTRIL APVMLVSLLF GMVDAIKGSS LAHVLPDFMA HLPLSDAGMA WLVPSVVTLV
GAVACDRMLG KPREALA
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