| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_1913 |
|---|
| Symbol | |
|---|
| ID | 5842126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | + |
|---|
| Start bp | 1976111 |
|---|
| End bp | 1977463 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641377095 |
|---|
| Product | branched-chain amino acid transport system II carrier protein |
|---|
| Protein accession | YP_001644773 |
|---|
| Protein GI | 163939889 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1114] Branched-chain amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0827616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATGA AAAGCATGAA GGGACGTTTA AGGCCAGGTG ATACGGTAGC GATTGGTTTA
ATGTTATTTG CACTATTTTT AGGAGCAGGA AATTTAATTT TCCCGCCAGT TTTAGGTCAA
CAAGCAGGAG AAAATGTTTG GATTGCTACA ATTGGATTCC TTGTAACGGG AGTCGGATTA
CCCCTATTAG CTGTAACAGC TGTCGCGTTT GTAGAGGGGG ACTTGAAAGC GCTATCTTCT
AGAGTTCACC CTATATTTGC GTTTATTTTC CCATTGATTA GTTATTTAGC GATTGGACCA
TTTTTTGCGA TTCCGCGTAC TGGAGCTGTT TCATTTGAAA TGGGTATGAA GCCATTTCTA
TCAGAGACAA TGGTTTCTGA GTGGTACATG CTATTTCTTT TCACTATAGT TTTCTTCGGA
ATAACGTGGT ATTTATCATT AAATCCATCT AAATTAGTGG ATTGGTTCGG GAAATTTCTT
ACACCATTGT TAGTATTGAT TGTTGCTGTT ATTGTCGGAA AAGCAATTAT TGATCCAATT
GGAGAACCGG CTGCACCTTT AGCTGCTTAT AAAGAGAATG CTTTCTTTGG TGGATTTATT
CAAGGATATT TAACGATGGA TGCGATTAGT GCACTTGTGT TTGGGATTGT TGTTGTACAA
GTTATTCGCT CAAAAGGGAT AAAAGAGAGC GGACAAATCG CAAAAATAAC AGTTGTATCA
GGGGTTATTG CTGTATTAGG CTTAACGTTA ATATATTTAT CACTTGCATA TCTCGGATCT
ACAAGTACAT CACTTGGTGT GTCGGAGAAC GGTGGTCTTA TTTTAACGAA TGTTGTAAAT
GAGTTATATG GAACAAGTGG CAAAATTTTA TTAGGACTTG TAATTATACT CGCTTGTTTA
ACAACTTCTG TTGGATTAAC ATCTGCGTGT GCTGGCTTCT TTACAAACTT ATTCCCAAAA
CTTTCGCATA AAACGATTGT AACTATGGTA TGTGTATTTA GTTTAATTGT ATCTAACCTA
GGGTTAACAC AATTAATCAC AGTAACATTA CCAGTGTTAA TGATCATTTA TCCAGTTGCA
ATTGTATTAA TCGTTCTTTC ATATTTCCAT AAATGGATAG GGAAGCGTAA TACAATATAT
ATTGGAGCTA TTTTAGGTGC GTTGTTAATT AGTTTCTTTA ACGGTTTAGA AAGTGCGAAC
ATTAAAATTG ATGCGATTTC TAATGTGCTA CAAATGTTAC CATTATATAA AGAAGGAATA
GGATGGCTAA TCCCATCATG TATTGGCGGG ATTCTCGGTT TCTTCTTCTA TAAATCAAAT
GAATTAAGTG AATTACAAAA GAAAGGTGCT TAG
|
|---|
| Protein sequence | MQMKSMKGRL RPGDTVAIGL MLFALFLGAG NLIFPPVLGQ QAGENVWIAT IGFLVTGVGL
PLLAVTAVAF VEGDLKALSS RVHPIFAFIF PLISYLAIGP FFAIPRTGAV SFEMGMKPFL
SETMVSEWYM LFLFTIVFFG ITWYLSLNPS KLVDWFGKFL TPLLVLIVAV IVGKAIIDPI
GEPAAPLAAY KENAFFGGFI QGYLTMDAIS ALVFGIVVVQ VIRSKGIKES GQIAKITVVS
GVIAVLGLTL IYLSLAYLGS TSTSLGVSEN GGLILTNVVN ELYGTSGKIL LGLVIILACL
TTSVGLTSAC AGFFTNLFPK LSHKTIVTMV CVFSLIVSNL GLTQLITVTL PVLMIIYPVA
IVLIVLSYFH KWIGKRNTIY IGAILGALLI SFFNGLESAN IKIDAISNVL QMLPLYKEGI
GWLIPSCIGG ILGFFFYKSN ELSELQKKGA
|
|---|
| |