| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0894 |
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| Symbol | |
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| ID | 6115128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1191939 |
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| End bp | 1193288 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632378 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_001759283 |
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| Protein GI | 170725257 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.45318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGGC GAAAAGTGCA AGATAAACAA ATGACTATAG CTGACACCTT GGGCTTGGGT
TTTATGACCT TTGCTTTTTT CTTAGGTGCA GGAAACTTAA TTTTCCCGCC ACTTGCGGGA
TTTCTCTCTG GTGAGAATAT GAACCTAGCT ATGCTTGGTT TCCTCATCAC TGCGGTGACA
CTGCCTTTGA TCACCTTGAT AGCCGTTGCT AAGGCAAACG GCAAGATCAT GGGGTTACTT
CCGCCGCTGG CTGCAACCGT ATTCGCTGTT GCCATCTACA TCGTTATTGG TCCAGCTTTC
GCTGCGCCTC GTGCTGGTCT CGTTGCCTAT GAGATGGGGT TTAAACCTTT CTTAGCCGAC
AGCAGTGCTA CCTTTATGTT GGCGGGAATT ACACTTAATA TCTCTCAGCT TATCTACTCA
GTTATCTTTT TTGGTGGCGC CATGCTGTTG GCACTTTACC CAGGTAAACT GCTAGATAGC
GTTGGGAAAA TCCTTACGCC AATCATGTTA GCGCTTCTGG TGGCTCTTGC AGCCTCGGTA
TTTATGACTC CTGGTGCTGA AATTAGCCAT GCAGTAGGGG ATTATCAGAG TAACCCGTTA
ACCAAAGGTA TCCTTGAGGG ATACAATACG ATGGATACAC TGGCTTCACT CATCTTTGGT
ATGTTGATTA TCGATATTCT ACGCCGAAAA GGGGTAAGTG ATAGCAAAGC TCAAACTAAA
TACCTGATTC AAGCTGCCTT TATCGCGGCT GCTGGCTTAG CATTTGTCTA CATTTCACTC
TTCTATTTAG GGGCAACGGG CGGTGATATT GCTGCTGGCG CCGATAATGG TGGCGTGATT
CTTACTAATT ATGTGAACCG TGAGTTTGGT GAGTTTGGCA AGATACTCTT AGCGGCTGTG
GTGACTCTAG CTTGTTTAAC CACAGTGATT GGCTTAGTGA CAGCGTGTGC TGAGTTCTTT
AATGAGCTCA TTCCAAGCCT CTCATACCGT ACATTTGTGA TTATTATCAG CCTTATCTGT
GCAACGGTTG CTAATGTTGG TTTATCTCAG CTGATCAGCA TCAGCGTTCC TGTGCTCTAT
ACCATCTATC CAGTTGCTAT CGCATTGGTT GCTGTGACTT TCCTGACTGA GAAGTTTTCA
ATGCCTGAGT TCTCTCACCG TATCGTGTTA AGTGTTGCAC TGGTATTTGG TGTGATTGAT
GGATTGAAAG CGGCTGGTGT TAATATGGAT TTATTTAACT TTATGCCATT ACACAGTGAG
GGGATGGCTT GGTTATTACC TACAGGTTTA ACGATAATTG CTTGTTTATT GGTAAAAAAG
CCTAAGACTG ATCCGTTATT GAACTCCTGA
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| Protein sequence | MMGRKVQDKQ MTIADTLGLG FMTFAFFLGA GNLIFPPLAG FLSGENMNLA MLGFLITAVT
LPLITLIAVA KANGKIMGLL PPLAATVFAV AIYIVIGPAF AAPRAGLVAY EMGFKPFLAD
SSATFMLAGI TLNISQLIYS VIFFGGAMLL ALYPGKLLDS VGKILTPIML ALLVALAASV
FMTPGAEISH AVGDYQSNPL TKGILEGYNT MDTLASLIFG MLIIDILRRK GVSDSKAQTK
YLIQAAFIAA AGLAFVYISL FYLGATGGDI AAGADNGGVI LTNYVNREFG EFGKILLAAV
VTLACLTTVI GLVTACAEFF NELIPSLSYR TFVIIISLIC ATVANVGLSQ LISISVPVLY
TIYPVAIALV AVTFLTEKFS MPEFSHRIVL SVALVFGVID GLKAAGVNMD LFNFMPLHSE
GMAWLLPTGL TIIACLLVKK PKTDPLLNS
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