179 homologs were found in PanDaTox collection
for query gene VEA_004443 on replicon NC_013456
Organism: Vibrio sp. Ex25



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009457  VC0395_A0193  branched chain amino acid transport system II carrier protein  78.72 
 
 		 437 aa  676    Vibrio cholerae O395  Bacteria  normal  0.820087  n/a   
 
 
-
 
NC_013456  VEA_004443  branched-chain amino acid transport system carrier protein  100 
 
 		 436 aa  860    Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_00954  hypothetical protein  88.79 
 
 		 473 aa  786    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I0560  branched chain amino acid transport system II carrier protein  68.05 
 
 		 437 aa  606  9.999999999999999e-173  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_0769  branched-chain amino acid transport system II carrier protein  52.95 
 
 		 443 aa  443  1e-123  Shewanella loihica PV-4  Bacteria  normal  0.949455  normal  0.0746903 
 
 
-
 
NC_009901  Spea_0804  branched-chain amino acid transport system II carrier protein  55.41 
 
 		 448 aa  441  9.999999999999999e-123  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_0894  branched-chain amino acid transport system II carrier protein  53.86 
 
 		 449 aa  439  9.999999999999999e-123  Shewanella woodyi ATCC 51908  Bacteria  normal  0.45318  normal  1 
 
 
-
 
NC_009831  Ssed_0892  branched-chain amino acid transport system II carrier protein  55.23 
 
 		 443 aa  439  9.999999999999999e-123  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.0108632 
 
 
-
 
NC_008700  Sama_2740  branched-chain amino acid transport system II carrier protein BrnQ  50.68 
 
 		 441 aa  422  1e-117  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_3450  branched-chain amino acid transport system II carrier protein  50.54 
 
 		 470 aa  404  1e-111  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_3644  branched-chain amino acid transport system II carrier protein  50.54 
 
 		 470 aa  404  1e-111  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007954  Sden_0746  branched-chain amino acid transport system II carrier protein  52.06 
 
 		 442 aa  403  1e-111  Shewanella denitrificans OS217  Bacteria  normal  0.707148  n/a   
 
 
-
 
NC_009052  Sbal_0842  branched-chain amino acid transport system II carrier protein  50.54 
 
 		 466 aa  404  1e-111  Shewanella baltica OS155  Bacteria  normal  0.809943  n/a   
 
 
-
 
NC_009665  Shew185_3525  branched-chain amino acid transport system II carrier protein  50.54 
 
 		 470 aa  404  1e-111  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_0662  branched-chain amino acid transport system II carrier protein  52.09 
 
 		 438 aa  397  1e-109  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_3332  branched-chain amino acid transport system II carrier protein  51.86 
 
 		 467 aa  387  1e-106  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_0949  branched-chain amino acid transport system II carrier protein BrnQ  52.44 
 
 		 462 aa  383  1e-105  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0794  branched-chain amino acid transport system II carrier protein  51.42 
 
 		 467 aa  383  1e-105  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3229  branched-chain amino acid transport system II carrier protein  51.42 
 
 		 467 aa  383  1e-105  Shewanella sp. MR-7  Bacteria  normal  0.980889  normal  1 
 
 
-
 
NC_009438  Sputcn32_0889  branched-chain amino acid transport system II carrier protein  50.98 
 
 		 467 aa  381  1e-104  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_43920  branched chain amino acid transporter  47.71 
 
 		 437 aa  367  1e-100  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_3684  branched chain amino acid ABC transporter  47.02 
 
 		 548 aa  360  3e-98  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_5360  branched-chain amino acid transport system II carrier protein  49.31 
 
 		 437 aa  345  1e-93  Delftia acidovorans SPH-1  Bacteria  normal  0.256076  normal  1 
 
 
-
 
NC_007492  Pfl01_1619  branched chain amino acid ABC transporter carrier protein  43.71 
 
 		 437 aa  332  9e-90  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.758971  normal  0.0622571 
 
 
-
 
NC_010498  EcSMS35_0432  branched-chain amino acid transport system II carrier protein  42.42 
 
 		 439 aa  331  2e-89  Escherichia coli SMS-3-5  Bacteria  normal  0.922576  normal  1 
 
 
-
 
CP001509  ECD_00349  predicted branched chain amino acid transporter (LIV-II)  42.18 
 
 		 439 aa  330  3e-89  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_3208  branched-chain amino acid transport system II carrier protein  42.18 
 
 		 439 aa  330  3e-89  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_0478  branched-chain amino acid transport system II carrier protein  42.18 
 
 		 439 aa  330  3e-89  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.709941  normal  1 
 
 
-
 
NC_012892  B21_00353  hypothetical protein  42.18 
 
 		 439 aa  330  3e-89  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3232  branched-chain amino acid transport system II carrier protein  42.18 
 
 		 439 aa  330  3e-89  Escherichia coli ATCC 8739  Bacteria  normal  0.686325  unclonable  0.0000000117832 
 
 
-
 
NC_010658  SbBS512_E0320  branched-chain amino acid transport system II carrier protein  42.18 
 
 		 439 aa  330  3e-89  Shigella boydii CDC 3083-94  Bacteria  normal  0.259108  n/a   
 
 
-
 
NC_009800  EcHS_A0471  branched-chain amino acid transport system II carrier protein  42.18 
 
 		 439 aa  330  3e-89  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_0431  branched-chain amino acid transport system II carrier protein  42.18 
 
 		 439 aa  330  3e-89  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011149  SeAg_B0438  branched-chain amino acid transport system II carrier protein  41.94 
 
 		 439 aa  327  2.0000000000000001e-88  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_3507  branched-chain amino acid transport system II carrier protein  43.96 
 
 		 437 aa  327  2.0000000000000001e-88  Pseudomonas putida W619  Bacteria  normal  1  normal  0.717571 
 
 
-
 
NC_012880  Dd703_2911  branched-chain amino acid transport system II carrier protein  42.11 
 
 		 439 aa  327  3e-88  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C0499  branched-chain amino acid transport system II carrier protein  41.71 
 
 		 439 aa  327  3e-88  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011080  SNSL254_A0444  branched-chain amino acid transport system II carrier protein  41.71 
 
 		 439 aa  327  3e-88  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011205  SeD_A0438  branched-chain amino acid transport system II carrier protein  41.71 
 
 		 439 aa  327  3e-88  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.54427  normal  1 
 
 
-
 
NC_011094  SeSA_A0457  branched-chain amino acid transport system II carrier protein  41.71 
 
 		 439 aa  327  3e-88  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_4184  branched chain amino acid ABC transporter carrier protein  43.96 
 
 		 437 aa  327  4.0000000000000003e-88  Pseudomonas putida KT2440  Bacteria  normal  0.579709  normal  1 
 
 
-
 
NC_009512  Pput_1670  branched-chain amino acid transport system II carrier protein  43.96 
 
 		 437 aa  326  5e-88  Pseudomonas putida F1  Bacteria  normal  0.129788  normal  1 
 
 
-
 
NC_009439  Pmen_2498  branched-chain amino acid transport system II carrier protein  45.97 
 
 		 437 aa  325  1e-87  Pseudomonas mendocina ymp  Bacteria  normal  0.331302  normal  0.203368 
 
 
-
 
NC_012912  Dd1591_3102  branched-chain amino acid transport system II carrier protein  41.13 
 
 		 440 aa  325  1e-87  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_39050  branched-chain amino acid transport carrier  42.79 
 
 		 437 aa  324  2e-87  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.379222  normal  0.362487 
 
 
-
 
NC_004578  PSPTO_2206  branched-chain amino acid transport system II carrier protein  42.86 
 
 		 437 aa  321  1.9999999999999998e-86  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_3325  branched-chain amino acid transport system II carrier protein  42.6 
 
 		 437 aa  320  3e-86  Pseudomonas aeruginosa PA7  Bacteria  normal  0.106259  n/a   
 
 
-
 
NC_010322  PputGB1_3755  branched-chain amino acid transport system II carrier protein  42.82 
 
 		 437 aa  318  1e-85  Pseudomonas putida GB-1  Bacteria  normal  0.642485  normal  1 
 
 
-
 
NC_007005  Psyr_2015  branched chain amino acid ABC transporter carrier protein  43.2 
 
 		 437 aa  317  2e-85  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.453737  normal  0.890863 
 
 
-
 
NC_013421  Pecwa_3298  branched-chain amino acid transport system II carrier protein  41.39 
 
 		 439 aa  312  6.999999999999999e-84  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_1012  branched-chain amino acid transport system II carrier protein  40.66 
 
 		 439 aa  311  2e-83  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_0869  branched-chain amino acid transport system II carrier protein  41.94 
 
 		 439 aa  309  5e-83  Enterobacter sp. 638  Bacteria  normal  0.978124  normal  1 
 
 
-
 
NC_011772  BCG9842_B3847  branched-chain amino acid transport system II carrier protein  42.59 
 
 		 448 aa  309  6.999999999999999e-83  Bacillus cereus G9842  Bacteria  hitchhiker  0.00000203183  hitchhiker  0.00000000239284 
 
 
-
 
NC_009832  Spro_1045  branched-chain amino acid transport system II carrier protein  40.76 
 
 		 439 aa  308  9e-83  Serratia proteamaculans 568  Bacteria  normal  0.864553  normal  0.21687 
 
 
-
 
NC_010159  YpAngola_A3283  branched-chain amino acid transport system II carrier protein  40.33 
 
 		 439 aa  308  2.0000000000000002e-82  Yersinia pestis Angola  Bacteria  normal  1  normal  0.0308168 
 
 
-
 
NC_010465  YPK_3273  branched-chain amino acid transport system II carrier protein  40.33 
 
 		 439 aa  308  2.0000000000000002e-82  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1365  branched-chain amino acid transport system II carrier protein  42.13 
 
 		 451 aa  308  2.0000000000000002e-82  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00132143  n/a   
 
 
-
 
NC_009708  YpsIP31758_3133  branched-chain amino acid transport system II carrier protein  40.33 
 
 		 439 aa  308  2.0000000000000002e-82  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_1324  branched-chain amino acid transport protein  41.9 
 
 		 451 aa  306  3e-82  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000000172075  n/a   
 
 
-
 
NC_006274  BCZK1323  branched-chain amino acid transport protein  41.9 
 
 		 451 aa  307  3e-82  Bacillus cereus E33L  Bacteria  decreased coverage  0.00120773  n/a   
 
 
-
 
NC_011725  BCB4264_A1497  branched-chain amino acid transport system II carrier protein  42.96 
 
 		 451 aa  305  7e-82  Bacillus cereus B4264  Bacteria  unclonable  0.0000870089  n/a   
 
 
-
 
NC_009832  Spro_3953  branched-chain amino acid transport system II carrier protein  41.49 
 
 		 439 aa  305  9.000000000000001e-82  Serratia proteamaculans 568  Bacteria  normal  0.726579  normal  1 
 
 
-
 
NC_011773  BCAH820_1533  branched-chain amino acid transport system II carrier protein  41.67 
 
 		 451 aa  305  9.000000000000001e-82  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.93507e-19 
 
 
-
 
NC_011658  BCAH187_A1603  branched-chain amino acid transport system II carrier protein  42.36 
 
 		 451 aa  305  9.000000000000001e-82  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000188549  n/a   
 
 
-
 
NC_005945  BAS1350  branched-chain amino acid transport system II carrier protein  41.67 
 
 		 451 aa  303  3.0000000000000004e-81  Bacillus anthracis str. Sterne  Bacteria  normal  0.0128918  n/a   
 
 
-
 
NC_007530  GBAA_1459  branched chain amino acid ABC transporter carrier protein  41.67 
 
 		 451 aa  303  3.0000000000000004e-81  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.210353  n/a   
 
 
-
 
NC_003909  BCE_1565  branched-chain amino acid transport system II carrier protein  42.13 
 
 		 451 aa  301  2e-80  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00000310033  n/a   
 
 
-
 
NC_005957  BT9727_1751  branched-chain amino acid transport system carrier protein  40.62 
 
 		 452 aa  301  2e-80  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  1.04073e-17  n/a   
 
 
-
 
NC_009674  Bcer98_1161  branched-chain amino acid transport system II carrier protein  40.36 
 
 		 451 aa  301  2e-80  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.328055  n/a   
 
 
-
 
NC_009674  Bcer98_1551  branched-chain amino acid transport system II carrier protein  39.04 
 
 		 465 aa  300  2e-80  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.818102  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1773  branched-chain amino acid transport system II carrier protein  40.62 
 
 		 452 aa  300  4e-80  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000130057  n/a   
 
 
-
 
NC_006274  BCZK1729  branched-chain amino acid transport system carrier protein  40.38 
 
 		 452 aa  298  9e-80  Bacillus cereus E33L  Bacteria  hitchhiker  0.0000468898  n/a   
 
 
-
 
NC_005945  BAS2920  branched-chain amino acid transport system II carrier protein  38.95 
 
 		 450 aa  296  3e-79  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_3142  branched chain amino acid ABC transporter carrier protein  38.95 
 
 		 450 aa  296  3e-79  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.569946  n/a   
 
 
-
 
NC_011772  BCG9842_B3254  branched-chain amino acid transport system II carrier protein  38.58 
 
 		 450 aa  296  4e-79  Bacillus cereus G9842  Bacteria  normal  0.104949  normal  0.486135 
 
 
-
 
NC_011725  BCB4264_A2053  branched-chain amino acid transport system II carrier protein  38.79 
 
 		 450 aa  296  5e-79  Bacillus cereus B4264  Bacteria  normal  0.087988  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1913  branched-chain amino acid transport system II carrier protein  38.55 
 
 		 450 aa  295  1e-78  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0827616  n/a   
 
 
-
 
NC_011658  BCAH187_A2163  branched-chain amino acid transport system II carrier protein  38.34 
 
 		 450 aa  295  1e-78  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_3153  branched-chain amino acid transport system II carrier protein  38.72 
 
 		 450 aa  295  2e-78  Bacillus cereus AH820  Bacteria  n/a    normal  0.611345 
 
 
-
 
NC_011773  BCAH820_1945  branched-chain amino acid transport system II carrier protein  40.62 
 
 		 452 aa  293  3e-78  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.15478e-28 
 
 
-
 
NC_006274  BCZK1869  branched-chain amino acid transport system carrier protein  38.57 
 
 		 448 aa  293  6e-78  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS1916  branched-chain amino acid transport system II carrier protein  38.34 
 
 		 448 aa  290  3e-77  Bacillus anthracis str. Sterne  Bacteria  normal  0.377142  n/a   
 
 
-
 
NC_013457  VEA_000813  branched-chain amino acid transport system carrier protein  39.23 
 
 		 436 aa  290  3e-77  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2063  branched chain amino acid ABC transporter carrier protein  38.34 
 
 		 445 aa  290  3e-77  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_2095  branched-chain amino acid transport system II carrier protein  38.34 
 
 		 450 aa  290  4e-77  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005957  BT9727_1878  branched-chain amino acid transport system carrier protein  38.12 
 
 		 448 aa  290  5.0000000000000004e-77  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.343185  n/a   
 
 
-
 
NC_009784  VIBHAR_06721  hypothetical protein  39.43 
 
 		 436 aa  286  4e-76  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B3429  branched-chain amino acid transport system II carrier protein  40.79 
 
 		 452 aa  283  6.000000000000001e-75  Bacillus cereus G9842  Bacteria  hitchhiker  0.000169589  hitchhiker  0.000000128434 
 
 
-
 
NC_011725  BCB4264_A1915  branched-chain amino acid transport system II carrier protein  40.79 
 
 		 452 aa  282  7.000000000000001e-75  Bacillus cereus B4264  Bacteria  normal  0.0189448  n/a   
 
 
-
 
NC_009674  Bcer98_3237  branched-chain amino acid transport system II carrier protein  39.3 
 
 		 443 aa  282  7.000000000000001e-75  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.188718  n/a   
 
 
-
 
NC_005957  BT9727_2898  branched-chain amino acid transport system carrier protein  38.27 
 
 		 450 aa  281  1e-74  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00345664  n/a   
 
 
-
 
NC_006274  BCZK4294  branched-chain amino acid transport system II carrier protein  39.95 
 
 		 441 aa  281  1e-74  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_4663  branched-chain amino acid transport system II carrier protein  40.41 
 
 		 441 aa  281  1e-74  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00341134 
 
 
-
 
NC_003909  BCE_4673  branched-chain amino acid transport system II carrier protein  40.65 
 
 		 441 aa  281  2e-74  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3188  branched-chain amino acid transport system II carrier protein  41.45 
 
 		 436 aa  280  2e-74  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.00000000414074  n/a   
 
 
-
 
NC_005957  BT9727_4283  branched-chain amino acid transport system II carrier protein  40.41 
 
 		 441 aa  281  2e-74  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A2016  branched-chain amino acid transport system II carrier protein  40.56 
 
 		 452 aa  280  4e-74  Bacillus cereus AH187  Bacteria  unclonable  0.0000000186213  n/a   
 
 
-
 
NC_003909  BCE_1994  branched-chain amino acid transport system II carrier protein  40.56 
 
 		 452 aa  280  4e-74  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000216802  n/a   
 
 
-
 
NC_008599  CFF8240_1152  branched-chain amino acid transport system II carrier protein  37.21 
 
 		 434 aa  279  7e-74  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.291372  n/a   
 
 
-
 
NC_011725  BCB4264_A0856  branched-chain amino acid transport system II carrier protein  37.01 
 
 		 438 aa  276  4e-73  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
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