| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0949 |
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| Symbol | brnQ |
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| ID | 1168795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 985012 |
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| End bp | 986400 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637342916 |
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| Product | branched-chain amino acid transport system II carrier protein BrnQ |
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| Protein accession | NP_716578 |
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| Protein GI | 24372536 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTG GGGATACATT AGGCTTAGGT TTTATGACCT TCGCGTTTTT TTTAGGAGCG
GGCAACTTAA TTTTCCCTCC CTTTGCGGGC ATGTTGGCTG GGGAGAATAT GCTCCTTGCC
ATGTTAGGTT TTCTTATTAC TGCCGTAGGG TTACCTTTAG TTGGGCTCAT TGCTGTTGCT
AAGGCTCAAG GTAAGGTTAT GGCAATGTTG CCAGTGTTTG CGGCAACGGC ATTAGCGATT
GCGATTTATA TTATTATTGG GCCTGCATTT GCGGCGCCAC GTACAGGCTT AGTGGCCTAT
GAAATCGGTG CTAAGCCCTT TATCGATAAC ACGACGGCCA CCATCATGCT TGGCAGTTTA
TCGCTGAATC TCTCGCAACT GATTTATACC TTGGGCTTTT TTATTGTGAC TATGCTGCTG
GCGTTGTTTC CTGGCAAATT ACTTGATAGT GTAGGTAAGG TATTAACGCC TATCCTATTG
TTATTGTTAG TTGGTTTAGC ATTATCAGTG TTGTTTTTAC CTGCCTCTGA AGTCGGTGTT
GCAGTAGGTG ACTATAAGAA CCATCCTCTG ACGAAAGGTA TCTTAGAAGG CTACAATACT
ATGGATACCC TAGCGTCTTT GATGTTTGGC ATGTTGATTA TCGATCTGCT GCGTAAAAAG
GGTATCGAAC AACCAAGTGC GCAAACCAAA TACCTTATTC GCGCCGCCTT TATTGCTGCA
GCAGGTCTTG CCTTTGTTTA TGTGTCATTG TTCTTTTTAG GTGCTACGGC GGGTGATATT
GCCGCTGGTG CGAAAAACGG TGGTGAGATT TTAACTAACT ATGTGACCCG TGAGTTTGGC
AGTTTAGGTA CAGTGTTGTT ATCGGCCGTG GTGACTCTTG CTTGTTTAAC AACCGCTGTG
GGGCTAGTGA GCGCGTGTTC TGAGTTTTTT AATGAGTTAA TGCCGAAGCT GTCTTACCGT
TTTTTAGTGG TTGCATTAAG TGCTATCTGT GCCTTGATTG CTAACGTTGG GCTTTCACAA
CTGATTAATA TCAGTATTCC GGTGTTAATG GCCGTTTATC CTGTGGCTAT TGCGCTGGTG
GCGGTGACCT TCTTAACTGA ATATTTCCCT CGCCCGCAAT TTGCTCACCG TGCTGCACTT
TCTGTTGCGC TGCTGTTTGG TATTTTTGAT GGGATGAAAG TCGCAGCCAA AAGCCTTACG
GGAGAAGACG GTAGAGGTAT AACCGAATTT GCACAAAGCT TTATCGATTT TGTGAATGGC
ATGTCGCCTA CTTTGTCTAT TTTACCTCTG TATGAAGAGG GCATGGCGTG GTTATTGCCA
ACCTTAGTGG TGATTGTGCT GTGTTTAATT ATTCGTGGTA GTGGTGCAAA AACGGTCAGC
GCGGCATAA
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| Protein sequence | MSFGDTLGLG FMTFAFFLGA GNLIFPPFAG MLAGENMLLA MLGFLITAVG LPLVGLIAVA
KAQGKVMAML PVFAATALAI AIYIIIGPAF AAPRTGLVAY EIGAKPFIDN TTATIMLGSL
SLNLSQLIYT LGFFIVTMLL ALFPGKLLDS VGKVLTPILL LLLVGLALSV LFLPASEVGV
AVGDYKNHPL TKGILEGYNT MDTLASLMFG MLIIDLLRKK GIEQPSAQTK YLIRAAFIAA
AGLAFVYVSL FFLGATAGDI AAGAKNGGEI LTNYVTREFG SLGTVLLSAV VTLACLTTAV
GLVSACSEFF NELMPKLSYR FLVVALSAIC ALIANVGLSQ LINISIPVLM AVYPVAIALV
AVTFLTEYFP RPQFAHRAAL SVALLFGIFD GMKVAAKSLT GEDGRGITEF AQSFIDFVNG
MSPTLSILPL YEEGMAWLLP TLVVIVLCLI IRGSGAKTVS AA
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