179 homologs were found in PanDaTox collection
for query gene Psyr_2015 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002947  PP_4184  branched chain amino acid ABC transporter carrier protein  82.61 
 
 		 437 aa  697    Pseudomonas putida KT2440  Bacteria  normal  0.579709  normal  1 
 
 
-
 
NC_010501  PputW619_3507  branched-chain amino acid transport system II carrier protein  83.3 
 
 		 437 aa  704    Pseudomonas putida W619  Bacteria  normal  1  normal  0.717571 
 
 
-
 
NC_004578  PSPTO_2206  branched-chain amino acid transport system II carrier protein  94.97 
 
 		 437 aa  805    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_2015  branched chain amino acid ABC transporter carrier protein  100 
 
 		 437 aa  842    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.453737  normal  0.890863 
 
 
-
 
NC_007492  Pfl01_1619  branched chain amino acid ABC transporter carrier protein  86.73 
 
 		 437 aa  743    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.758971  normal  0.0622571 
 
 
-
 
NC_008463  PA14_39050  branched-chain amino acid transport carrier  79.03 
 
 		 437 aa  670    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.379222  normal  0.362487 
 
 
-
 
NC_009512  Pput_1670  branched-chain amino acid transport system II carrier protein  82.61 
 
 		 437 aa  697    Pseudomonas putida F1  Bacteria  normal  0.129788  normal  1 
 
 
-
 
NC_010322  PputGB1_3755  branched-chain amino acid transport system II carrier protein  83.75 
 
 		 437 aa  703    Pseudomonas putida GB-1  Bacteria  normal  0.642485  normal  1 
 
 
-
 
NC_009656  PSPA7_3325  branched-chain amino acid transport system II carrier protein  78.11 
 
 		 437 aa  664    Pseudomonas aeruginosa PA7  Bacteria  normal  0.106259  n/a   
 
 
-
 
NC_009832  Spro_1045  branched-chain amino acid transport system II carrier protein  70.51 
 
 		 439 aa  590  1e-167  Serratia proteamaculans 568  Bacteria  normal  0.864553  normal  0.21687 
 
 
-
 
CP001509  ECD_00349  predicted branched chain amino acid transporter (LIV-II)  68.07 
 
 		 439 aa  587  1e-166  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_3208  branched-chain amino acid transport system II carrier protein  68.07 
 
 		 439 aa  587  1e-166  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A0438  branched-chain amino acid transport system II carrier protein  68.07 
 
 		 439 aa  585  1e-166  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.54427  normal  1 
 
 
-
 
NC_010498  EcSMS35_0432  branched-chain amino acid transport system II carrier protein  68.07 
 
 		 439 aa  587  1e-166  Escherichia coli SMS-3-5  Bacteria  normal  0.922576  normal  1 
 
 
-
 
NC_010468  EcolC_3232  branched-chain amino acid transport system II carrier protein  68.07 
 
 		 439 aa  587  1e-166  Escherichia coli ATCC 8739  Bacteria  normal  0.686325  unclonable  0.0000000117832 
 
 
-
 
NC_012917  PC1_1012  branched-chain amino acid transport system II carrier protein  70.23 
 
 		 439 aa  587  1e-166  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012892  B21_00353  hypothetical protein  68.07 
 
 		 439 aa  587  1e-166  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C0499  branched-chain amino acid transport system II carrier protein  68.3 
 
 		 439 aa  586  1e-166  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A0457  branched-chain amino acid transport system II carrier protein  68.3 
 
 		 439 aa  586  1e-166  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011353  ECH74115_0478  branched-chain amino acid transport system II carrier protein  68.07 
 
 		 439 aa  587  1e-166  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.709941  normal  1 
 
 
-
 
NC_011149  SeAg_B0438  branched-chain amino acid transport system II carrier protein  68.3 
 
 		 439 aa  586  1e-166  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A3283  branched-chain amino acid transport system II carrier protein  70.23 
 
 		 439 aa  585  1e-166  Yersinia pestis Angola  Bacteria  normal  1  normal  0.0308168 
 
 
-
 
NC_010658  SbBS512_E0320  branched-chain amino acid transport system II carrier protein  68.07 
 
 		 439 aa  587  1e-166  Shigella boydii CDC 3083-94  Bacteria  normal  0.259108  n/a   
 
 
-
 
NC_011080  SNSL254_A0444  branched-chain amino acid transport system II carrier protein  68.3 
 
 		 439 aa  586  1e-166  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009800  EcHS_A0471  branched-chain amino acid transport system II carrier protein  68.07 
 
 		 439 aa  587  1e-166  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_0431  branched-chain amino acid transport system II carrier protein  68.07 
 
 		 439 aa  587  1e-166  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_3273  branched-chain amino acid transport system II carrier protein  70 
 
 		 439 aa  583  1.0000000000000001e-165  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_3133  branched-chain amino acid transport system II carrier protein  70 
 
 		 439 aa  583  1.0000000000000001e-165  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_3298  branched-chain amino acid transport system II carrier protein  70.23 
 
 		 439 aa  573  1.0000000000000001e-162  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_3102  branched-chain amino acid transport system II carrier protein  68.14 
 
 		 440 aa  570  1e-161  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_2911  branched-chain amino acid transport system II carrier protein  68.37 
 
 		 439 aa  567  1e-160  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_0869  branched-chain amino acid transport system II carrier protein  68.07 
 
 		 439 aa  563  1.0000000000000001e-159  Enterobacter sp. 638  Bacteria  normal  0.978124  normal  1 
 
 
-
 
NC_009832  Spro_3953  branched-chain amino acid transport system II carrier protein  61.07 
 
 		 439 aa  491  9.999999999999999e-139  Serratia proteamaculans 568  Bacteria  normal  0.726579  normal  1 
 
 
-
 
NC_008463  PA14_43920  branched chain amino acid transporter  58.35 
 
 		 437 aa  487  1e-136  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_3684  branched chain amino acid ABC transporter  57.21 
 
 		 548 aa  475  1e-133  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_2498  branched-chain amino acid transport system II carrier protein  57.89 
 
 		 437 aa  459  9.999999999999999e-129  Pseudomonas mendocina ymp  Bacteria  normal  0.331302  normal  0.203368 
 
 
-
 
NC_010002  Daci_5360  branched-chain amino acid transport system II carrier protein  57.01 
 
 		 437 aa  417  9.999999999999999e-116  Delftia acidovorans SPH-1  Bacteria  normal  0.256076  normal  1 
 
 
-
 
NC_009092  Shew_0769  branched-chain amino acid transport system II carrier protein  43.41 
 
 		 443 aa  341  1e-92  Shewanella loihica PV-4  Bacteria  normal  0.949455  normal  0.0746903 
 
 
-
 
NC_009783  VIBHAR_00954  hypothetical protein  44.69 
 
 		 473 aa  332  9e-90  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_3188  branched-chain amino acid transport system II carrier protein  42.53 
 
 		 436 aa  330  3e-89  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.00000000414074  n/a   
 
 
-
 
NC_011312  VSAL_I0560  branched chain amino acid transport system II carrier protein  40.96 
 
 		 437 aa  327  2.0000000000000001e-88  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_1551  branched-chain amino acid transport system II carrier protein  44.73 
 
 		 465 aa  327  2.0000000000000001e-88  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.818102  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1913  branched-chain amino acid transport system II carrier protein  43.56 
 
 		 450 aa  327  3e-88  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0827616  n/a   
 
 
-
 
NC_011658  BCAH187_A2163  branched-chain amino acid transport system II carrier protein  43.09 
 
 		 450 aa  326  5e-88  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A2053  branched-chain amino acid transport system II carrier protein  43.33 
 
 		 450 aa  325  1e-87  Bacillus cereus B4264  Bacteria  normal  0.087988  n/a   
 
 
-
 
NC_008700  Sama_2740  branched-chain amino acid transport system II carrier protein BrnQ  42.19 
 
 		 441 aa  325  1e-87  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B3254  branched-chain amino acid transport system II carrier protein  43.09 
 
 		 450 aa  324  2e-87  Bacillus cereus G9842  Bacteria  normal  0.104949  normal  0.486135 
 
 
-
 
NC_013456  VEA_004443  branched-chain amino acid transport system carrier protein  42.4 
 
 		 436 aa  322  9.999999999999999e-87  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_0842  branched-chain amino acid transport system II carrier protein  42.21 
 
 		 466 aa  319  7.999999999999999e-86  Shewanella baltica OS155  Bacteria  normal  0.809943  n/a   
 
 
-
 
NC_011663  Sbal223_3450  branched-chain amino acid transport system II carrier protein  41.99 
 
 		 470 aa  318  1e-85  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_3644  branched-chain amino acid transport system II carrier protein  41.99 
 
 		 470 aa  318  2e-85  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_3525  branched-chain amino acid transport system II carrier protein  41.99 
 
 		 470 aa  318  2e-85  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0892  branched-chain amino acid transport system II carrier protein  41.83 
 
 		 443 aa  317  2e-85  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.0108632 
 
 
-
 
NC_005945  BAS1916  branched-chain amino acid transport system II carrier protein  42.86 
 
 		 448 aa  317  3e-85  Bacillus anthracis str. Sterne  Bacteria  normal  0.377142  n/a   
 
 
-
 
NC_011773  BCAH820_2095  branched-chain amino acid transport system II carrier protein  42.62 
 
 		 450 aa  316  4e-85  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005957  BT9727_1878  branched-chain amino acid transport system carrier protein  42.39 
 
 		 448 aa  316  5e-85  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.343185  n/a   
 
 
-
 
NC_009457  VC0395_A0193  branched chain amino acid transport system II carrier protein  45.67 
 
 		 437 aa  316  6e-85  Vibrio cholerae O395  Bacteria  normal  0.820087  n/a   
 
 
-
 
NC_006274  BCZK1869  branched-chain amino acid transport system carrier protein  42.62 
 
 		 448 aa  315  8e-85  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_0894  branched-chain amino acid transport system II carrier protein  41.78 
 
 		 449 aa  315  9.999999999999999e-85  Shewanella woodyi ATCC 51908  Bacteria  normal  0.45318  normal  1 
 
 
-
 
NC_005945  BAS2920  branched-chain amino acid transport system II carrier protein  42 
 
 		 450 aa  314  1.9999999999999998e-84  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2063  branched chain amino acid ABC transporter carrier protein  42.86 
 
 		 445 aa  314  1.9999999999999998e-84  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_3142  branched chain amino acid ABC transporter carrier protein  42 
 
 		 450 aa  314  1.9999999999999998e-84  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.569946  n/a   
 
 
-
 
NC_009901  Spea_0804  branched-chain amino acid transport system II carrier protein  41.81 
 
 		 448 aa  312  5.999999999999999e-84  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_3153  branched-chain amino acid transport system II carrier protein  41.76 
 
 		 450 aa  310  2e-83  Bacillus cereus AH820  Bacteria  n/a    normal  0.611345 
 
 
-
 
NC_007954  Sden_0746  branched-chain amino acid transport system II carrier protein  42.82 
 
 		 442 aa  310  2.9999999999999997e-83  Shewanella denitrificans OS217  Bacteria  normal  0.707148  n/a   
 
 
-
 
NC_008345  Sfri_0662  branched-chain amino acid transport system II carrier protein  42.18 
 
 		 438 aa  308  1.0000000000000001e-82  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1773  branched-chain amino acid transport system II carrier protein  42.17 
 
 		 452 aa  305  9.000000000000001e-82  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000130057  n/a   
 
 
-
 
NC_005957  BT9727_1751  branched-chain amino acid transport system carrier protein  40.14 
 
 		 452 aa  301  2e-80  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  1.04073e-17  n/a   
 
 
-
 
NC_006274  BCZK1729  branched-chain amino acid transport system carrier protein  40.14 
 
 		 452 aa  301  2e-80  Bacillus cereus E33L  Bacteria  hitchhiker  0.0000468898  n/a   
 
 
-
 
NC_009438  Sputcn32_0889  branched-chain amino acid transport system II carrier protein  41.33 
 
 		 467 aa  301  2e-80  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_0949  branched-chain amino acid transport system II carrier protein BrnQ  41.56 
 
 		 462 aa  300  3e-80  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3332  branched-chain amino acid transport system II carrier protein  41.33 
 
 		 467 aa  300  3e-80  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_0794  branched-chain amino acid transport system II carrier protein  41.37 
 
 		 467 aa  300  5e-80  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3229  branched-chain amino acid transport system II carrier protein  41.37 
 
 		 467 aa  299  8e-80  Shewanella sp. MR-7  Bacteria  normal  0.980889  normal  1 
 
 
-
 
NC_011773  BCAH820_1533  branched-chain amino acid transport system II carrier protein  38.95 
 
 		 451 aa  297  2e-79  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.93507e-19 
 
 
-
 
NC_005957  BT9727_2898  branched-chain amino acid transport system carrier protein  41.53 
 
 		 450 aa  297  2e-79  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00345664  n/a   
 
 
-
 
NC_011725  BCB4264_A1497  branched-chain amino acid transport system II carrier protein  39.18 
 
 		 451 aa  296  3e-79  Bacillus cereus B4264  Bacteria  unclonable  0.0000870089  n/a   
 
 
-
 
NC_006274  BCZK1323  branched-chain amino acid transport protein  38.95 
 
 		 451 aa  297  3e-79  Bacillus cereus E33L  Bacteria  decreased coverage  0.00120773  n/a   
 
 
-
 
NC_003909  BCE_1565  branched-chain amino acid transport system II carrier protein  38.27 
 
 		 451 aa  296  5e-79  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00000310033  n/a   
 
 
-
 
NC_005945  BAS1350  branched-chain amino acid transport system II carrier protein  38.95 
 
 		 451 aa  296  7e-79  Bacillus anthracis str. Sterne  Bacteria  normal  0.0128918  n/a   
 
 
-
 
NC_007530  GBAA_1459  branched chain amino acid ABC transporter carrier protein  38.95 
 
 		 451 aa  296  7e-79  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.210353  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1365  branched-chain amino acid transport system II carrier protein  38.72 
 
 		 451 aa  296  7e-79  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00132143  n/a   
 
 
-
 
NC_005957  BT9727_1324  branched-chain amino acid transport protein  38.72 
 
 		 451 aa  295  8e-79  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000000172075  n/a   
 
 
-
 
NC_011658  BCAH187_A1603  branched-chain amino acid transport system II carrier protein  38.5 
 
 		 451 aa  295  1e-78  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000188549  n/a   
 
 
-
 
NC_009674  Bcer98_1161  branched-chain amino acid transport system II carrier protein  38.36 
 
 		 451 aa  295  1e-78  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.328055  n/a   
 
 
-
 
NC_003909  BCE_2133  branched-chain amino acid transport system II carrier protein  45.94 
 
 		 360 aa  294  2e-78  Bacillus cereus ATCC 10987  Bacteria  normal  0.773417  n/a   
 
 
-
 
NC_011772  BCG9842_B3847  branched-chain amino acid transport system II carrier protein  38.72 
 
 		 448 aa  294  2e-78  Bacillus cereus G9842  Bacteria  hitchhiker  0.00000203183  hitchhiker  0.00000000239284 
 
 
-
 
NC_011725  BCB4264_A1915  branched-chain amino acid transport system II carrier protein  41.25 
 
 		 452 aa  288  2e-76  Bacillus cereus B4264  Bacteria  normal  0.0189448  n/a   
 
 
-
 
NC_011773  BCAH820_1945  branched-chain amino acid transport system II carrier protein  39.68 
 
 		 452 aa  287  2e-76  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.15478e-28 
 
 
-
 
NC_011658  BCAH187_A2016  branched-chain amino acid transport system II carrier protein  41.69 
 
 		 452 aa  288  2e-76  Bacillus cereus AH187  Bacteria  unclonable  0.0000000186213  n/a   
 
 
-
 
NC_011772  BCG9842_B3429  branched-chain amino acid transport system II carrier protein  41.45 
 
 		 452 aa  286  5e-76  Bacillus cereus G9842  Bacteria  hitchhiker  0.000169589  hitchhiker  0.000000128434 
 
 
-
 
NC_006274  BCZK0700  branched-chain amino acid transport protein  37.2 
 
 		 438 aa  286  5.999999999999999e-76  Bacillus cereus E33L  Bacteria  hitchhiker  0.000173599  n/a   
 
 
-
 
NC_003909  BCE_1994  branched-chain amino acid transport system II carrier protein  41.45 
 
 		 452 aa  285  8e-76  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000216802  n/a   
 
 
-
 
NC_011658  BCAH187_A0966  branched-chain amino acid transport system II carrier protein  37.2 
 
 		 438 aa  285  1.0000000000000001e-75  Bacillus cereus AH187  Bacteria  unclonable  0.0000000062732  n/a   
 
 
-
 
NC_011725  BCB4264_A0856  branched-chain amino acid transport system II carrier protein  36.96 
 
 		 438 aa  284  2.0000000000000002e-75  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_0392  branched-chain amino acid transport system II carrier protein  36.65 
 
 		 445 aa  283  3.0000000000000004e-75  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_0388  branched-chain amino acid transport system II carrier protein  36.43 
 
 		 445 aa  283  5.000000000000001e-75  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0715  branched-chain amino acid transport system II carrier protein  37.02 
 
 		 438 aa  282  1e-74  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000614247  n/a   
 
 
-
 
NC_011773  BCAH820_0745  branched-chain amino acid transport system II carrier protein  35.47 
 
 		 433 aa  279  9e-74  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000572919 
 
 
-
 
NC_007530  GBAA_0690  branched chain amino acid ABC transporter carrier protein  35.47 
 
 		 433 aa  278  2e-73  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00000770045  n/a   
 
 
-
 
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