Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3283 |
Symbol | brnQ |
ID | 5801760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3485485 |
End bp | 3486804 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641341107 |
Product | branched-chain amino acid transport system II carrier protein |
Protein accession | YP_001607629 |
Protein GI | 162421631 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1114] Branched-chain amino acid permeases |
TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0308168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCATC GTTTATCATC TAAAGATATT ATGGCATTAG GTTTTATGAC CTTTGCCTTA TTCGTTGGGG CGGGCAACAT CATCTTCCCA CCGATGGTTG GATTACAGTC AGGAGAACAT GTGTGGTGGG CCGCTCTGGG CTTCCTGATT ACTGCCGTTG GGTTACCGGT TATTACCGTT ATTGCTCTGG CCCGGGTCGG GGGCGGTATT GATGCTCTGA GTACGCCAAT TGGTCGTAGT GCTGGTTTGG TGCTGGCTAC TGTCTGTTAT TTGGCGGTAG GCCCATTATT TGCCATTCCG CGCACTGCTA CCGTTTCCTT CGAGGTCGGC ATTGCGCCTT TAACGGGTAA TGGCCCGTTA CCGCTGTTTA TCTATAGCGT TGTTTATTTT GCATTGGTTA TTGGAATTTC ACTGTACCCA GGGCGCTTGT TGGATACGGT CGGGCATATT CTGGCTCCGT TGAAAATTTT AGCGTTAGCT ATTTTGGGGA TTGCGGCCCT GATCTGGCCT GCGGGGCCGT TGATTACAGC AACAGATGCT TATCAGCAAG CTCCCTTTTC CTCCGGTTTC GTTAATGGCT ATCTCACCAT GGATACCTTG GGTGCATTAG TCTTCGGTAT TGTTATCGTG AATGCAGCCC GCTCGCGTGG TGTGGTTTCT GCCGTGTTAC TGACGCGTTA TACCATTTGG GCGGGGTTGA TTGCCGGTAT TGGCCTGACT CTGGTTTACC TAAGCCTGTT TAAATTAGGC TCTAGCAGCG GTAGTTTGGT ACCTGATGCG CAAAATGGCG CGGTCATCTT GCATGCTTAT GTCCAGCACA CCTTTGGTGG CTTGGGCAGT ATGTTCCTGG CGGCACTGAT CTTTATTGCC TGTATGGTGA CGGCAGTTGG CCTGACCTGC GCTTGTGCTG AATTCTTTGC GCAATACCTG CGGCTGTCAT ACCGGACACT GGTGTTTATC CTCGGTATCT TCTCGATGCT GGTCTCTAAT CTGGGGCTGA GCCACCTTAT CCAGATTTCT ATTCCGGTCC TGACGGCGAT TTATCCGCCT TGTATCGTGC TGGTTTTGAT GAGCTTTACC TTACGCTGGT GGCAGCATGC ATCACGTATC GTCGCGCCAG TTATGTTGAT TAGCTTGGTA TTCGGTATTC TTGATGCCGT GAAAGCGTCT ACTTTTGCGA ATTTTTTACC GGCATGGGCT CATCATCTGC CTCTGGCAGA ACAAGGTCTG GCATGGTTAC CGCCTTCCTT GCTGGTATTC GTCGTCATAG GGTTGTACGA TCGCATTTTC TGTCGCCAGA AAATTGTGGT TAAACAATAG
|
Protein sequence | MSHRLSSKDI MALGFMTFAL FVGAGNIIFP PMVGLQSGEH VWWAALGFLI TAVGLPVITV IALARVGGGI DALSTPIGRS AGLVLATVCY LAVGPLFAIP RTATVSFEVG IAPLTGNGPL PLFIYSVVYF ALVIGISLYP GRLLDTVGHI LAPLKILALA ILGIAALIWP AGPLITATDA YQQAPFSSGF VNGYLTMDTL GALVFGIVIV NAARSRGVVS AVLLTRYTIW AGLIAGIGLT LVYLSLFKLG SSSGSLVPDA QNGAVILHAY VQHTFGGLGS MFLAALIFIA CMVTAVGLTC ACAEFFAQYL RLSYRTLVFI LGIFSMLVSN LGLSHLIQIS IPVLTAIYPP CIVLVLMSFT LRWWQHASRI VAPVMLISLV FGILDAVKAS TFANFLPAWA HHLPLAEQGL AWLPPSLLVF VVIGLYDRIF CRQKIVVKQ
|
| |