| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0746 |
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| Symbol | |
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| ID | 4016852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 867278 |
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| End bp | 868606 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954731 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_561759 |
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| Protein GI | 91792108 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.707148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGAATA ATAAAATGAG TGTCACTGAC ACTATTGGCT TAGGTTTTAT GACCTTCGCT
TTTTTCTTGG GTGCAGGTAA CATTATTTTC CCACCTTTCG CTGGCATGTT GGCCGGTGAA
AACATGCTGC CAGCCATGAT GGGCTTCCTC ATTACTGCCG TTGGCTTACC GCTCTTGGGA
CTTATTGCCA TTGCTAAATC TAACGGTAAG GTAATGGCAT TATTGCCAAC CTTTGCGGCA
ACCGCCTTAG CCATTACCAT TTATGTCATT ATTGGTCCCG CGTTCGCAGC GCCTCGCACT
AGCTTAGTGG CCTTTGAAAT TGGCGCTAGA CCCTTTATTG ATAATCCAGA ACTCACCACC
TTGATCGCTG GTACTGAATT CAATTTACCG CAACTTATCT ACACCACAGT GTTTTTTATC
ATCACCATGT TATTGGCCTT GTTCCCTGGC AACTTACTCG ATAGCGTGGG TAAGGTACTC
ACACCGATTT TGATTGTGCT GTTAATGGGT TTAGCTGTGT CAGTCATTTT ACTTCCTGGT
GCTGATGTGG GCGCCGCTGT GGGGGCGTAC CAAAATAGTC CGCTGACCAA AGGCATCTTG
GAAGGTTATA ACACCATGGA TACCTTAGCA TCCTTGATGT TTGGTATTCT TATCATCGAC
TTGCTACGTA AAAAAGGCGT AGAAAACGCT AAAGATCAAA CCAAGTATTT GATCAGAGCC
GCGCTGATTG CCGCTGCCGG CTTGGCCTTC GTCTATGTGT CACTGTTTTA TCTTGGCGCA
ACCGCGGGCA CTTTGGCCGA AGGCGCTGCC AACGGCGGTC AAATCCTGAC AAACTTTGTT
AACCATGAAT TTGGCGTGAC AGGTACCTTT ATGTTGTCCT TAGTGGTGAC TTTGGCCTGT
TTGACCACGG CGGTTGGACT TGTGACTGCG TGTTCTGAAT ATTTCAACGA GTTGATCCCA
GCATTGTCTT ACCGTTTACT GGCGGTATTT TTTAGCGTGA CCTGCGCTGT GGTGGCCAAT
GTGGGCTTAA GTGAGCTTAT TCGCATCAGT ATTCCTGTGT TGATGACCAT ATATCCCGTG
GCTATTGCAT TGGTGATGGT GACGTTATTG ACCAATCGAT TTAATCACCC TGTGTTTGCC
CACAGGCTAG TGTTAAGTGT GGCGCTTTTC TTCGGTATAT TCGATGGCCT GCAAGCGGCA
GGCATCGACA TGAGCATACT CGATTTTATG CCGTTACATG CTGAAGGTAT GGCGTGGCTA
CCACCTACAT TTATCACCAT AGTGGCTTGC TTATTTATGC CTAAAACGGC GCAAGTTGCC
CAAAGCTAA
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| Protein sequence | MQNNKMSVTD TIGLGFMTFA FFLGAGNIIF PPFAGMLAGE NMLPAMMGFL ITAVGLPLLG
LIAIAKSNGK VMALLPTFAA TALAITIYVI IGPAFAAPRT SLVAFEIGAR PFIDNPELTT
LIAGTEFNLP QLIYTTVFFI ITMLLALFPG NLLDSVGKVL TPILIVLLMG LAVSVILLPG
ADVGAAVGAY QNSPLTKGIL EGYNTMDTLA SLMFGILIID LLRKKGVENA KDQTKYLIRA
ALIAAAGLAF VYVSLFYLGA TAGTLAEGAA NGGQILTNFV NHEFGVTGTF MLSLVVTLAC
LTTAVGLVTA CSEYFNELIP ALSYRLLAVF FSVTCAVVAN VGLSELIRIS IPVLMTIYPV
AIALVMVTLL TNRFNHPVFA HRLVLSVALF FGIFDGLQAA GIDMSILDFM PLHAEGMAWL
PPTFITIVAC LFMPKTAQVA QS
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