| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2206 |
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| Symbol | brnQ |
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| ID | 1183857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2430007 |
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| End bp | 2431320 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393587 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | NP_792027 |
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| Protein GI | 28869408 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCT TGAAAGGCCA GGACATCCTG GCACTCGGTT TTATGACATT TGCCCTGTTT
GTCGGGGCTG GCAACATCAT CTTTCCGCCC ATCGTAGGCC TGCAGGCCGG GCCGCATGTA
TGGATGGCGG CGCTCGGTTT TCTGGTCACG GCGGTCGGTC TGCCGGTGAT CACCGTGATC
GCCCTGGCCA AGGTTGGCGG CGCGATGGAT GCTTTGAGCA GCCCGATCGG CAAGATTGCC
GGCGGGGCAC TTGCGGCGGT CTGCTATCTG GCGGTCGGTC CGCTGTTCGC GACCCCGCGC
ACAGCCACCG TTTCGTTTGA AGTCGGTCTG GCCCCGCTGA CCGGCGACAG CCCGATGGCG
CTGCTCCTCT ACAGCCTGGT GTATTTCCTG GTGGTGTTCT GGGTCTCGCT GTATCCGGGG
CGCTTGCTGG ATACGGTCGG GCGCTTTCTG GCACCACTCA AGATCTTCGC CCTGGCGGTG
TTGGGGGTTG CGGCGTTCGC CTTGCCAGCA GGCGGCATAG GCGAGGCCGA GCCGGCTTAT
GCGATCGCGC CGTTTTCTCA GGGTTTCATC AATGGCTATC TGACCATGGA CACGCTGGGT
GCGCTGGTCT TCGGCATTGT CATCGTCAAT GCCATCCGCT CTCGCGGTGT CGAGTCGCCG
CGTCTGATCA CTCGCTACGC GATCATCGCC GGGCTGATTG CCGGTGTCGG GCTGGCGCTG
GTGTATGTCA GCCTGTTTCG TCTGGGCTCC GGCAGTCATG CGGTCGCAGC AGGCGCGAGT
AACGGCGCTG CGGTCCTGCA TGCCTACGTG CAGCACACCT TCGGTTCGCT GGGCAGCGGC
TTTCTTGCCG TGCTGATTTC TCTTGCCTGT CTGGTCACGG CGGTGGGCCT GACCTGCGCC
TGTGCGGAAT ACTTCGCCAA GGTGCTGCCG TTGTCCTATC GAACGCTGGT GATCATTTTG
GCGGTGTTTT CGTTACTGGT GTCCAATCTG GGGCTGACCA GGCTGATCCA GTTTTCGATT
CCGGTGCTGA CAGCGATCTA TCCGCCGTGC ATCGTGCTGG TCGCGCTGAG CTTCTGCAAA
GGCCTCTGGC AGAGTCAGGG CAGGGTGGTC GCGCCAGTCA TGCTGGTGTC GTTCGTTTTC
GGCCTTGTCG ACGCGCTCAA GGGGGCAGGT TTTGGTGAGT ACCTGCCGGG TGCGCTGACC
AGTATGCCGC TGAGTGATCA GGGGCTTGCG TGGCTGGTGC CATCGGTCAT CACCCTGGCG
GGCGCAGTGG TGATCGACCG GGTCATGGGC AAGCGTAGCG AGGCGCTGGC TTGA
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| Protein sequence | MKVLKGQDIL ALGFMTFALF VGAGNIIFPP IVGLQAGPHV WMAALGFLVT AVGLPVITVI
ALAKVGGAMD ALSSPIGKIA GGALAAVCYL AVGPLFATPR TATVSFEVGL APLTGDSPMA
LLLYSLVYFL VVFWVSLYPG RLLDTVGRFL APLKIFALAV LGVAAFALPA GGIGEAEPAY
AIAPFSQGFI NGYLTMDTLG ALVFGIVIVN AIRSRGVESP RLITRYAIIA GLIAGVGLAL
VYVSLFRLGS GSHAVAAGAS NGAAVLHAYV QHTFGSLGSG FLAVLISLAC LVTAVGLTCA
CAEYFAKVLP LSYRTLVIIL AVFSLLVSNL GLTRLIQFSI PVLTAIYPPC IVLVALSFCK
GLWQSQGRVV APVMLVSFVF GLVDALKGAG FGEYLPGALT SMPLSDQGLA WLVPSVITLA
GAVVIDRVMG KRSEALA
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