| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3229 |
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| Symbol | |
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| ID | 4255730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3822690 |
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| End bp | 3824093 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638123912 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_739269 |
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| Protein GI | 114048719 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.980889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGACA ATCAGATGAG TATCGGGGAT ACATTAGGCT TAGGTTTTAT GACCTTTGCA
TTTTTTTTGG GGGCGGGTAA CTTAATTTTT CCACCCTTTG CGGGTATGTT GGCCGGGGAG
AATATGTTCC TTGCCATGTT AGGTTTTCTC ATCACTGCCG TAGGTTTACC TTTAGTCGGG
CTCATTGCTG TTGCTAAGGC TCAAGGTAAG GTTATGGCAA TGCTGCCAGT GTTTGCGGCA
ACCGCATTGG CAATCGCGAT TTATATCATT ATTGGGCCCG CGTTTGCGGC GCCACGTACC
GGCCTTGTGG CCTATGAAAT CGGTGCAAAG CCCTTTATCG ATAACACGAC TGCGACCATT
ATGCTCGGCA GTGTATCGCT TAATTTGTCG CAGTTAATCT ATACCCTGTG CTTCTTTACC
GTGACTATGC TACTGGCATT GTTCCCCGGT AAATTACTCG ACAGCGTCGG TAAAGTATTA
ACTCCTATCC TATTGTTATT GTTGGTAGGT TTAGCCTTGT CTGTGGTGTT TTTACCCGCA
GCAGATGTTG GCGTGGCCGT GGGTGACTAC CAAAACCATC CGCTGACCAA AGGTATCCTC
GAAGGCTACA ACACCATGGA TACCCTAGCG TCGTTGATGT TTGGTATGTT GATTATCGAT
CTGCTGCGTA AAAAGGGGAT CGACCAACCT AGCGCGCAGA CTAAATATTT GATCCGCGCC
GCCTTTATTG CGGCGGCAGG TCTTGCTTTT GTTTATGTGT CATTGTTCTT TTTAGGTGCA
ACGGCGGGTG ATATTGCCGT GGGTGCTAAA AACGGTGGCG AGATATTAAC TAACTATGTA
ACACGTGAAT TTGGCAGCCT AGGTATGGTG TTGCTTTCAA CGGTAGTGAC TCTGGCCTGT
TTAACCACTG CTGTCGGTTT AGTGAGTGCC TGCTCAGAGT TTTTCAATGA GTTGATGCCA
AAGCTGTCTT ACCGTTTCTT GGTGGTTGTA CTCAGCGCTA TCTGTGCCTT GATTGCGAAC
GTGGGGCTGT CTCAGCTGAT CGCGATCAGT ATTCCTGTGT TGATGGCAGT TTACCCTGTG
GCTATTACCT TAGTGGCGGT AACTTTCTTG ACCGAATACT TCCCGCGTCC ACAGTTTGCT
CACCGTGCTG CACTGTCTGT GGCACTGCTG TTTGGTATTT TCGATGGGAT GAAAGTCGCG
GCGAAAGGCC TCACAGGTGA AGACGGTAAA GGCATCACCG AAGCGGCGCA GAGCTTTATC
GATATGGTGA GTGGTATGTC TCCCACACTG TCGATTTTAC CTCTGTATGA AGAGGGGATG
GCGTGGTTAC TGCCCACCTT AGTCGTGATC GTGCTGTGTT TATTGTTTGG CCGCGGCGGT
GCGAAAGCGG TCAGCGCAGC ATAA
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| Protein sequence | MQDNQMSIGD TLGLGFMTFA FFLGAGNLIF PPFAGMLAGE NMFLAMLGFL ITAVGLPLVG
LIAVAKAQGK VMAMLPVFAA TALAIAIYII IGPAFAAPRT GLVAYEIGAK PFIDNTTATI
MLGSVSLNLS QLIYTLCFFT VTMLLALFPG KLLDSVGKVL TPILLLLLVG LALSVVFLPA
ADVGVAVGDY QNHPLTKGIL EGYNTMDTLA SLMFGMLIID LLRKKGIDQP SAQTKYLIRA
AFIAAAGLAF VYVSLFFLGA TAGDIAVGAK NGGEILTNYV TREFGSLGMV LLSTVVTLAC
LTTAVGLVSA CSEFFNELMP KLSYRFLVVV LSAICALIAN VGLSQLIAIS IPVLMAVYPV
AITLVAVTFL TEYFPRPQFA HRAALSVALL FGIFDGMKVA AKGLTGEDGK GITEAAQSFI
DMVSGMSPTL SILPLYEEGM AWLLPTLVVI VLCLLFGRGG AKAVSAA
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