| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0804 |
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| Symbol | |
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| ID | 5661203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 996241 |
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| End bp | 997587 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235349 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_001500666 |
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| Protein GI | 157960632 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGGGC ATAAAGTGCA GAATAATCAA ATGAGTATTG CAGACACGCT AGGGTTAGGT
TTTATGACCT TTGCGTTTTT TTTGGGGGCT GGTAATTTAA TCTTCCCTCC TTTAGCTGGC
TATTTGGCAG GCGAAAATAT CACGCTAGCT ATGTTTGGCT TTCTTATTAC AGCGGTCGGT
CTTCCCCTTA TTACTCTGAT TGCTGTCGCT AAGGCGAACG GTAAAATTAT GCAGTTGCTG
CCTCCCATCG CAGCGACCGC ATTAGCAGTG TCAATTTTTA TCATCATAGG TCCAGCGTTC
GCCGCACCAA GAACCGGACT CGTGGCTTAT GAAGTCGGCT TTAAGCCATT TTTAGAAGAT
ACATCAGCCA CCTTTATGAT AGCTGGTTTG ACCTTTAACA TAACTCAGCT TATTTATACG
TTGGGCTTCT TTGGTCTTTC AATGGTGTTA GCGCTGTTCC CGGGTAAGTT GTTGGATAGC
GTCGGTAAAG TATTAACCCC TATTCTGATC CTGTTGTTAG TAGGTCTAGC GATCTCTGTT
ATCGTGATCC CTGGTAGCGA TATTGGTGCT GCGGTTGGCG ATTATCAAGC AAATCCACTT
ACTAAGGGGA TCTTGGAAGG CTATAACACC ATGGATACCT TGGCTTCATT GATCTTCGGT
ATGTTGATTA TCGATATCCT GCGCAAGAAA GGTATCACTG AGCCAAAAGC ACAGACTAAC
TATCTGATTA AAGCTGCACT AATTGCTGCG GCAGGCTTGG CATTTGTTTA TGTGTCTCTA
TTTTACTTAG GCGCAACGGC GGGGGATTTA GCTGTTGGTG CAGAAAACGG CGGCGTGATC
TTAACTAATT ACGTTATCGC TAAATTTGGC GCAAGCGGCA TGGTATTGCT TTCATCTGTA
GTAACACTAG CCTGTTTAAC CACTGCGGTA GGCCTTATTA GTGCCTGTAG TGAGTACTTT
AACGAGCTAT TGCCAAAGAT CTCTTACCGT CGTTTTGTTG TATTGGTGAG TGTTGTTTGT
GCAACCGTTG CTAACGTTGG TTTAGCGCAG CTAATCGACA TCAGCGTGCC TGTACTCATG
ACTGTTTACC CTGTGGCGAT CGCATTGGTT GCGGTGACCT TCTTAACTGA ACGTTTTGCT
CACCCAAAAA CAGCGCATCG CTTAGTTGTT AGTGTGGCGC TATTCTTCGG TATTATTGAT
GGCTTTAAAG CGGCTAAAGT TGATGTAAGC ATGTTTAACT TTATGCCACT ACATAACGAA
GGCATGGCAT GGTTGCTACC AACAGCTATC GTGATTGTGG CTTGTATGCT GATTAAAAAG
CCTAACCAGC AGCTAGCGGC AAACTAA
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| Protein sequence | MMGHKVQNNQ MSIADTLGLG FMTFAFFLGA GNLIFPPLAG YLAGENITLA MFGFLITAVG
LPLITLIAVA KANGKIMQLL PPIAATALAV SIFIIIGPAF AAPRTGLVAY EVGFKPFLED
TSATFMIAGL TFNITQLIYT LGFFGLSMVL ALFPGKLLDS VGKVLTPILI LLLVGLAISV
IVIPGSDIGA AVGDYQANPL TKGILEGYNT MDTLASLIFG MLIIDILRKK GITEPKAQTN
YLIKAALIAA AGLAFVYVSL FYLGATAGDL AVGAENGGVI LTNYVIAKFG ASGMVLLSSV
VTLACLTTAV GLISACSEYF NELLPKISYR RFVVLVSVVC ATVANVGLAQ LIDISVPVLM
TVYPVAIALV AVTFLTERFA HPKTAHRLVV SVALFFGIID GFKAAKVDVS MFNFMPLHNE
GMAWLLPTAI VIVACMLIKK PNQQLAAN
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