| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0560 |
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| Symbol | |
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| ID | 6986553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 614058 |
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| End bp | 615371 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378946 |
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| Product | branched chain amino acid transport system II carrier protein |
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| Protein accession | YP_002262081 |
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| Protein GI | 209694153 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACAAT CACTAAAACT AACCGATATC ATAGCCGTTG GCTTTATGCT TTTTGCCTTC
TTTTTAGGTG CAGGCAACAT TATATTTCCA CCAATTGCAG GTCAGATGGC CGGTGAACAT
GTTTACAGTG CAATGGGGGG GTTCCTTATT ACTGCGGTAG GTTTACCTCT TATGACCATT
ATTACTATTG GTGTAGCCGG TGGATCTTGG CAGCAACTTA CTCGTGATTT ACCACCAAAA
GTAGCGATTA TTATGGCTAT TTTGATGTTT GTTATCATTG GGCCTGCATT TGCTGCCCCT
CGTACAGGTT TAGTTGCTTA TGAAATGGCT GCAAAACCAT TTATGTCTGC TGATGCCGGA
CAAATATCAT TAACACTATT CTCAATCGCA TTCTTCTCAA TCGCAATGTT TTTTGCCTGG
TCGCAAGGTA AGCTTATCGA TACGATTGGT AAGTTTTTAA CGCCGGCATT ATTCATTGGT
TTAATCATTT TAGCGATTGC GGTATTTGTT AATCCACAAG GTGAGATTGT TGCAGCAACA
GGGAACTATA TCAATCAACC ATTAACGACT GGTTTCTTTG AAGGTTATAA CACCATGGAT
ACGTTTGGTG CGTTAATGTT TGGTATTTTA ATGATTGATG CATTAAAAAA GAAAGGCATT
ACAGATCATA AAGCGACCAC AAAATATTTA ACCGCAGCAG GTTGTATTGC GGCATTAGGC
CTAGCATTTG TTTATGTCTC TTTATTCTAC CTTGGTGCGA CGTCTAGCTC TGTTGCTCCA
GGTGCAACAA ATGGCGGTGA GATTTTAACT GCATATACTC ATGCGCTATT TGGATCTTCT
GGCCAAATCG TATTGTCTAT TATAGTTATG ATCGCTTGTT TAACGACGGC TATTGGTCTT
ATTTCCGCTT GTGCTGATTA CTTTAGTTCA ATTTGTAAGG TGACTTATAA AACATGGGTT
ATTGTTGTTG GTGTCGCTTG CGCTATTGTT GCTAATGTTG GTCTAACTCA GCTTATAGCA
TTATCGGTAC CAGTATTATT CCTACTTTAC CCTATTGCGA TGGCTCTGAT TGTTTTAGCA
TTTTTACGTC ATATGATGCC GAATCCTCGT CTGGCATACC GTGTCGTTGT TACTGTTGCA
ACTTGCTTTG CTGTATTAGA TGCGGCGAAA GTGGCGGGTG CAGATATGTC GGCATTCTCG
ATGCTACCAA TGTTTGATCG CGGTATGGCT TGGGTTATCC CTACGTTCGC TTCAATTATC
ATTGTTCGTT TTATTGGTAA GAAAGAAGAC GAGTTAGTGA CTAAAGAAGT GTAA
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| Protein sequence | MKQSLKLTDI IAVGFMLFAF FLGAGNIIFP PIAGQMAGEH VYSAMGGFLI TAVGLPLMTI
ITIGVAGGSW QQLTRDLPPK VAIIMAILMF VIIGPAFAAP RTGLVAYEMA AKPFMSADAG
QISLTLFSIA FFSIAMFFAW SQGKLIDTIG KFLTPALFIG LIILAIAVFV NPQGEIVAAT
GNYINQPLTT GFFEGYNTMD TFGALMFGIL MIDALKKKGI TDHKATTKYL TAAGCIAALG
LAFVYVSLFY LGATSSSVAP GATNGGEILT AYTHALFGSS GQIVLSIIVM IACLTTAIGL
ISACADYFSS ICKVTYKTWV IVVGVACAIV ANVGLTQLIA LSVPVLFLLY PIAMALIVLA
FLRHMMPNPR LAYRVVVTVA TCFAVLDAAK VAGADMSAFS MLPMFDRGMA WVIPTFASII
IVRFIGKKED ELVTKEV
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