| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3332 |
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| Symbol | |
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| ID | 4477633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3993560 |
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| End bp | 3994963 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727942 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_870962 |
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| Protein GI | 117921770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGACA ATCAGATGAG TATCGGGGAT ACATTAGGCT TAGGTTTTAT GACCTTCGCG
TTTTTTTTGG GGGCGGGTAA CTTAATTTTT CCACCCTTTG CGGGTATGTT GGCCGGGGAG
AATATGCCCC TTGCCATGTT AGGCTTTCTC ATCACTGCCG TAGGTTTACC TTTAGTCGGG
CTCATTGCTG TTGCTAAGGC TCAAGGTAAG GTTATGGCAA TGCTGCCAGT GTTTGCGGCA
ACCGCTTTGG CCATCGCGAT TTATATCATT ATTGGACCAG CGTTTGCGGC GCCGCGTACG
GGTCTTGTGG CCTATGAAAT CGGTGCTAAG CCCTTTATCG ACAACACTAC GGCGACCATT
ATGCTCGGCA GTTTGTCGCT GAATCTGTCG CAACTTATCT ACACCCTGTG CTTCTTCACT
GTGACTATGC TACTGGCATT GTTCCCCGGT AAGTTACTGG ACAGCGTCGG TAAAGTATTA
ACTCCTATCC TGTTGTTATT ACTGGTCGGT TTAGCCTTAT CAGTGGTGTT TTTACCCGCA
GGCGATGTTG GCGCGGCCGT GGGTGACTAC CAAAACCATC CGCTGACCAA AGGTATCCTC
GAAGGCTATA ACACTATGGA TACCCTAGCG TCTTTGATGT TCGGTATGTT GATTATCGAT
CTGCTGCGTA AAAAGGGGAT TGACCAGCCT AGCGCGCAGA CTAAATACTT GATCCGCGCA
GCCTTTATCG CGGCGGCAGG GCTTGCTTTT GTTTATGTGT CACTGTTCTT TTTAGGTGCG
ACGGCGGGTG ATATTGCCGT GGGCGCTAAA AACGGTGGCG AGATTTTAAC TAACTATGTG
ACACGCGAGT TTGGCAGTTT GGGCACTGTA TTGCTGTCTA CCGTGGTGAC CTTAGCCTGT
TTAACCACGG CGGTCGGTTT AGTGAGTGCC TGCTCAGAGT TTTTCAATGA GCTGATGCCA
AAGCTGTCTT ACCGTTTCTT AGTGGTTCTA CTGAGCGCCA TCTGTGCCTT GATCGCAAAC
GTTGGTCTGT CGCAGTTAAT TACTATCAGT ATTCCGGTGT TGATGGCGGT TTACCCTGTG
GCGATTGCCT TAGTGGCGGT GACCTTCTTG ACCGAATACT TCCCGCGTCC ACAGTTTGCC
CATCGCGCGG CACTGTCGGT AGCCTTGCTG TTTGGTATTT TCGATGGGAT GAAAGTCGCA
GCGAAAAGCC TCACTGGTGA AGACGGTAAA GGCGTGACGG AAGCGGCGCA AAGCTTTATC
GATCTCGTCA GTGGTATGTC TCCAACGTTG TCTATCCTGC CACTGTATGA AGAGGGCATG
GCGTGGTTAT TACCAACGCT AGTGGTGATT GTGCTCTGTT TAATCATTCG TGGTAGCGGC
GCGAAAACTG TCAGCGCGGC ATAA
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| Protein sequence | MQDNQMSIGD TLGLGFMTFA FFLGAGNLIF PPFAGMLAGE NMPLAMLGFL ITAVGLPLVG
LIAVAKAQGK VMAMLPVFAA TALAIAIYII IGPAFAAPRT GLVAYEIGAK PFIDNTTATI
MLGSLSLNLS QLIYTLCFFT VTMLLALFPG KLLDSVGKVL TPILLLLLVG LALSVVFLPA
GDVGAAVGDY QNHPLTKGIL EGYNTMDTLA SLMFGMLIID LLRKKGIDQP SAQTKYLIRA
AFIAAAGLAF VYVSLFFLGA TAGDIAVGAK NGGEILTNYV TREFGSLGTV LLSTVVTLAC
LTTAVGLVSA CSEFFNELMP KLSYRFLVVL LSAICALIAN VGLSQLITIS IPVLMAVYPV
AIALVAVTFL TEYFPRPQFA HRAALSVALL FGIFDGMKVA AKSLTGEDGK GVTEAAQSFI
DLVSGMSPTL SILPLYEEGM AWLLPTLVVI VLCLIIRGSG AKTVSAA
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