| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3525 |
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| Symbol | |
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| ID | 5373238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4189959 |
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| End bp | 4191371 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640831785 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_001367715 |
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| Protein GI | 153002034 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCTTC CAGTGCAAGA CAATCAGATG AGTATCGCAG ATACATTGGG CTTAGGTTTT
ATGACCTTCG CATTCTTTTT AGGGGCAGGT AACCTAATTT TTCCACCGTT CGCGGGAATG
TTAGCGGGCG GTAATATGCC CCTCGCCATG TTGGGTTTTT TGATTACCGC CGTAGGTTTA
CCTTTAGTTG GACTGATTGC TGTCGCTAAG GCTCAAGGTA AGGTTATGGC TATGCTGCCA
GTATTTGCAG CAACGACATT GGCTATCGCG ATTTATATCA TTATCGGCCC TGCGTTTGCT
GCGCCGCGTA CCGGTTTAGT GGCTTACGAG ATTGGCGCTA AGCCCTTTAT CGATGACACC
ACGGCCACAT TTTTACTGGG CAGTTTAGAA CTGAATCTGT CGCAACTGCT ATACACCATG
TGTTTCTTCA CTGTGACTAT GTTATTGGCG CTTTTCCCTG GCAAGCTGCT CGATAGTGTA
GGTAAAGTAT TAACGCCTAT TTTATTGATC TTGTTAGTTG GATTGGCTGC ATCTGTGATG
TTTTTACCCG CATCCGAAGT GGGCCAAGCC GTAGGCGATT ATCAAAACCA TCCGCTGACC
AAAGGTATTT TGGAAGGCTA CAACACTATG GATACGTTAG CGTCCTTGAT GTTTGGTATG
CTGATTATCG ATATCCTGCG CAAAAAGGGG ATTGATCAAC CCAGTGCTCA AACTAAATAT
CTGATCCGCG CCGCCTTTAT TGCTGCCGCT GGTTTAGCCT TTGTGTATGT GTCGCTGTTC
TTTTTAGGTG CGACCGCAGG CGATATCGCT ATCGGTGCTA AAAATGGCGG CGAGATCTTA
ACAAACTATG TGACCCGCGA ATTTGGTGAT TTAGGCTCAG TCTTACTGTC ATCGGTCGTG
ACTTTAGCTT GTTTAACCAC AGCGGTTGGC CTTGTGAGTG CATGTTCTGA GTTCTTTAAT
GAGCTGATGC CTAAACTGTC TTACCGTTTC CTAGTAATCT TCTTAAGCGT GATTTGTGCT
GTGATTGCTA ACGTGGGTCT TACGCAGCTT ATCGCCATCA GTATTCCTGT GTTGATGACG
ATTTATCCTG TGGCAATCGC TTTAGTGGTC ATCACTTTCT TGACCGCTTA TTTTGCAAAT
CCGCAGTTTG CACACCGTGC AGTACTGAGC GTGGCACTGT TTTTCGGCAT CTTCGATGGC
CTTAAAGTGG CGGCGAGCAG TTTGACTGGG GCAGATGGTC AAGCGGTGAA TGGCTTAGCG
CAGGGCTTTA TCCATGTCGT GGATGTTATG TCTCCCGTGT TATCTAAGCT GCCACTCTAT
GAAGAAGGCA TGGCTTGGTT ACTGCCAACG ATTGCAACCA TAGTACTGTG TTTAGTGTTT
GGTCGTGGCC GTGATCAAAC GGCAGCTGCT TAA
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| Protein sequence | MGLPVQDNQM SIADTLGLGF MTFAFFLGAG NLIFPPFAGM LAGGNMPLAM LGFLITAVGL
PLVGLIAVAK AQGKVMAMLP VFAATTLAIA IYIIIGPAFA APRTGLVAYE IGAKPFIDDT
TATFLLGSLE LNLSQLLYTM CFFTVTMLLA LFPGKLLDSV GKVLTPILLI LLVGLAASVM
FLPASEVGQA VGDYQNHPLT KGILEGYNTM DTLASLMFGM LIIDILRKKG IDQPSAQTKY
LIRAAFIAAA GLAFVYVSLF FLGATAGDIA IGAKNGGEIL TNYVTREFGD LGSVLLSSVV
TLACLTTAVG LVSACSEFFN ELMPKLSYRF LVIFLSVICA VIANVGLTQL IAISIPVLMT
IYPVAIALVV ITFLTAYFAN PQFAHRAVLS VALFFGIFDG LKVAASSLTG ADGQAVNGLA
QGFIHVVDVM SPVLSKLPLY EEGMAWLLPT IATIVLCLVF GRGRDQTAAA
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