| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004443 |
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| Symbol | |
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| ID | 8558211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3152697 |
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| End bp | 3154007 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407572 |
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| Product | branched-chain amino acid transport system carrier protein |
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| Protein accession | YP_003287066 |
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| Protein GI | 262395212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCAGA CGTTAAAACT AACAGATATT ATCGCAGTAG GCTTTATGCT ATTTGCGTTC
TTTTTGGGTG CGGGCAATAT CATCTTTCCA CCTCTAGCGG GTCAGCTAGC CGGTGAAAAC
TTAATGCCAG CGATGTTTGG TTTCTTGCTA ACAGCGGTAG GTCTACCTCT TATTACTATC
GTTGCTATTG CTGTAGCTGG TGGTTCTTGG GATCACTTAA CGCAAGACCT TCCGAAAAAA
GCAGCGGTTA TTATGGCTGC GTTGATCTTC ATCATCATCG GTCCTGCGTT TGCTGCGCCT
CGTACTGGCC TAGTGGCTTA CGAGATGGCG GTGAAACCTT TCTTCCTTGA AGCGTCACAA
ACGCATCTCA CTGCATTTTC AGTGATCTTC TTTATTGCGG CGATGATGTT CTCATGGTTC
CAAGGCCGTC TTATCGACTT GATTGGTAAA GTGCTGACTC CAGCGCTGTT TGTCGGTTTG
ATCATTCTTG CTGTCGCGGT ATTTATTGAT CCTCAAGGTG ACATGCTGGG CGCGCACGGT
GAGTACTTAA CGCAACCACT GACCAAAGGC TTCCTAGAAG GCTACAACAC AATGGATACG
TTCGCGTCAT TGATGTTTGG CATGCTGATG GTTGATGCAC TGCGCGGTAA AGGCATTACT
GAGCGTTCTG CAACGACTAA ATATCTGATC TATGCAGGTT GTATTGCCGC TGCCGGTCTT
GCGTTTGTTT ACATCTCACT ATTCTACTTG GGCGCGACGA GTGCAACTGT TGCTGCTGGT
GCAGATAACG GTGGTCTGGT ACTTAGCCAA TACGTTCAAG CGCTGTTTGG TCCATACGGT
CAAATCGTTC TGTCTGTCAT TGTATTACTA GCGTGTTTGA CAACGGCTAT TGGCTTGATT
TCTGCGTGTT CAGACTTCTT CAGCTCGAAA ACGCCACTGT CATACAAGCA ATGGGTACTG
ATTAACGGTT CTGTTTGTGC GTTGGTTGCG AATGTCGGCC TTGCACAACT GATTTCTCTG
TCAGTGCCAG TATTGTTTGC GCTGTACCCT GTGGCGATTG CGTTGGTTGC ACTAACATTT
GTACGCAGCA AACTGCCAAA TCCACGTTTT GCTTACCGCG CGGTACTGCT TGTATCTTTG
CTGTTTGCGT TGGTTGATGC GGCAAAAGTA TCGGGTGTTG ATGTTTCTGC GTTTAACATG
TTGCCACTAT TCGAAGTGGG CATGGGTTGG GTGCTTCCAA CATTTGCGGC TATTGTGTGC
ATGTTCTTCA TCGCGAAACC TCGTCCAGAG CTAGCACAAG AAACAGCGTA A
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| Protein sequence | MKQTLKLTDI IAVGFMLFAF FLGAGNIIFP PLAGQLAGEN LMPAMFGFLL TAVGLPLITI
VAIAVAGGSW DHLTQDLPKK AAVIMAALIF IIIGPAFAAP RTGLVAYEMA VKPFFLEASQ
THLTAFSVIF FIAAMMFSWF QGRLIDLIGK VLTPALFVGL IILAVAVFID PQGDMLGAHG
EYLTQPLTKG FLEGYNTMDT FASLMFGMLM VDALRGKGIT ERSATTKYLI YAGCIAAAGL
AFVYISLFYL GATSATVAAG ADNGGLVLSQ YVQALFGPYG QIVLSVIVLL ACLTTAIGLI
SACSDFFSSK TPLSYKQWVL INGSVCALVA NVGLAQLISL SVPVLFALYP VAIALVALTF
VRSKLPNPRF AYRAVLLVSL LFALVDAAKV SGVDVSAFNM LPLFEVGMGW VLPTFAAIVC
MFFIAKPRPE LAQETA
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