| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0999 |
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| Symbol | |
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| ID | 6962311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1094104 |
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| End bp | 1095420 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643382252 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_002265283 |
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| Protein GI | 209809744 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACAGAA GAGATCTTGC CGCTATCGGC TTTATGACAT TTGCACTATT TCTAGGTGCA
GGTAACTTAA TTTATCCACC CTTGATGGCA CAACAAGCAG GCGACAATTG GCTTATGGCT
ATTGCTGGCT TTCTATTAAC TGCCGTTGGT TTACCTGCCA TCACTTTGGT CGTATTAGGC
CGTTTATCTT CTGCGGATAA ACTGACGTCA TCATTACCTA AATGGATGGA CCGTTCATTC
TGGTTCTTGG TGTTAACGAC GTTAGGTCCT GCATTTGTAT TGCCTCGTGC GGTAACTGTT
GCTTATGAGA TGGGCATTAA ACCGTTCTAT TCTGGTAATG GATTGATGGT GTTCTCGGCG
TTGTTCTGTG CACTGACGTT ATGGTTGGCA TTAAAACCGG GTAAGTTGGT TGATTACATT
GGCAAGGTAA TGACACCTGC ATTGATTGCC ATGTTGGCAT TATTGGTGGC CGCTGCACTG
CTTAATCCTT TGGGTTCTCC AACTCAAGCG ATTGATATTT ATGAGCAAGC ACCGGCGGTT
AATGGCTTGA TTCAAGGTTA CATGACATTA GATGCAATCG CAGCGGTAGC GTTTGGTTGG
GTGATTATTC AAACCATCCG TAGTAAAGGG GTTGATAGTA AAAAAGCGAT TTCTTACTAC
ACATTACGTA TTGCGGTTAT TTATGCGGTA CTAATGTCAT TGTGTTATTT AGCGATGGGT
TATTTAGGCT CAACATCTTC TCAAATTGCA CCAAGTGCAA CTAACGGTGG TGAGATACTA
ACAAGCTATG CGGCGGGTGA GTTTGGCGTA TTAGGTCAAA TCCTATTAGC AGCGATTACC
TTGATGGCGT GTCTAACAAC AACAATTGGC TTAACGAATG CGAACTCTGA ATATTACAAG
AATACTTATG GTGTTACGTT TAAAGTAAGT GCTACGGTAA TTATGGTATT AACAGCAATC
ATTTCAAACG TTGGATTAGA AACGATTATT GAAGTGAGCT TACCTGCAAT CCTTATTCTG
TGTCCGATAG CAATAGCATT GATCATTGCG ATGATATTGA TGCCAGAGAA AACAGAATCA
GAGAAACGTA AGATCTCAGT GAGCCACACA ACAGTGGTAT GTATTGCGGC CTTGTTTGGT
ACGGTTGATG CCTTGCATAT TTTAGAGAAA CTACCAGAAG GCATTACCGC TTTCTGTGGC
CAATGGTTAC CGTTATTCTC TTCGCACACT TCTTGGTTGA TCCCTGTGCT TATCACGATT
TTTGTGAATA AAATGGCAAG AACAATGAAG CCAAAGAAGG TGATGATAAG CAACTAG
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| Protein sequence | MNRRDLAAIG FMTFALFLGA GNLIYPPLMA QQAGDNWLMA IAGFLLTAVG LPAITLVVLG
RLSSADKLTS SLPKWMDRSF WFLVLTTLGP AFVLPRAVTV AYEMGIKPFY SGNGLMVFSA
LFCALTLWLA LKPGKLVDYI GKVMTPALIA MLALLVAAAL LNPLGSPTQA IDIYEQAPAV
NGLIQGYMTL DAIAAVAFGW VIIQTIRSKG VDSKKAISYY TLRIAVIYAV LMSLCYLAMG
YLGSTSSQIA PSATNGGEIL TSYAAGEFGV LGQILLAAIT LMACLTTTIG LTNANSEYYK
NTYGVTFKVS ATVIMVLTAI ISNVGLETII EVSLPAILIL CPIAIALIIA MILMPEKTES
EKRKISVSHT TVVCIAALFG TVDALHILEK LPEGITAFCG QWLPLFSSHT SWLIPVLITI
FVNKMARTMK PKKVMISN
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