Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1220 |
Symbol | braB |
ID | 6986908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1326995 |
End bp | 1328293 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643379593 |
Product | branched chain amino acid transport system II carrier protein |
Protein accession | YP_002262692 |
Protein GI | 209694764 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1114] Branched-chain amino acid permeases |
TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.468414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAC ACAACTTGCT TGCGATTGGT CTAATGACGT TTGCCATGTT CCTTGGTGCA GGAAACATCA TATTCCCTCC TTTTCTTGGC CTTGAAGCAG GCACTCAATT TCTCCCTGCA ATGCTCGGCT TTTTACTTAC CGCGGTTGGA CTTCCAGCAT TAACGCTGAT TGTTTTAGGG CGACTGAGTA ACAGTGGTCA ACTAACTCAA GCGTTACCGA AACCATTGGC GATTGCTTTT TGGGTATTAC TTTTTATTGC AATTGGTCCT GCCTTCGGGA TGCCACGAGC AGTAACGGTT GCGTATGAAA TGGGGATTAA GCCCTTCTTT ACCGGTGACC ACCTAATGCT TTTCTCGGTT ATGTTTGTGG GAGCTACGTT ATTGTTGGCT TTCCAAAGAG GTAAGTTGGT GGATTACATT GGTAAAGTCA TGACGCCACT GCTTGTTCTT ATGCTAGCCG CGTTAGCGTT AGCGGCCATT ATTACGCCAT TAGGTGTTCT TGGTGAGCCG AGTGCCAGTT ATCAGCATAA AGCCATCACA AGCGGTTTGA TCCAAGGTTA CATGACAATG GATGCGATTG CGGCTGTTGG ATTTGGTTGG GTCATCATTA AAGCCATTCG TGATAAAGGG TGTGAATCAC CAAAAGATGT TTTTCAAGCA ACGCTTAAAG TAACGTTGAT TTATGCGCTG CTAATGTCGG CGTGTTATTT AGCCATGGCT TATGTTGGTG CGACATCAAC GTCTATTGCT GAAGGCGCAA CTAATGGTGG TGAATTACTA ACGCGTTATG TTGCTGAGAT ATTTGGACCA CTAGGTCAAT ACTTATTAGC AGGTATTATT ATTATGGCGT GTTTAACGAC GACGGTAGGG TTGACGAATG CATGTGCTGA GTACAGCCAA CAAACGTTCC GCACTCCGTT TGCGATTACC GCGATTATCG TTACAGCGAT GACAGGCGTT GTTGCTAACT TCGGATTAGA GCAAATCTTG GCTATCAGCT TACCTGCTAT ACTCATATTA TGTCCGGTAG CGATTGCTTT AGTATTAGCG GCGTGGTTTT TACCTACGAC AAAACACAAT ACTATTTCAT ACGTTAGTGT TGTGATGATT AGCGTTGTAT TTGGTGGGTT AGATGCACTG CATATTTTGG GTTTATTGTC TGATTCTTTA TCTGCATCAT TAACTCATTA TATTCCTCTC TTTTCGGCTC ATGCGAGTTG GTTTTTACCT GTAGTGATAA CTGTATTTAT TAGTCTATTA CTAAACCGAA AATCGAGTGC ATTAGAGTCA TCGAACTAA
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Protein sequence | MKKHNLLAIG LMTFAMFLGA GNIIFPPFLG LEAGTQFLPA MLGFLLTAVG LPALTLIVLG RLSNSGQLTQ ALPKPLAIAF WVLLFIAIGP AFGMPRAVTV AYEMGIKPFF TGDHLMLFSV MFVGATLLLA FQRGKLVDYI GKVMTPLLVL MLAALALAAI ITPLGVLGEP SASYQHKAIT SGLIQGYMTM DAIAAVGFGW VIIKAIRDKG CESPKDVFQA TLKVTLIYAL LMSACYLAMA YVGATSTSIA EGATNGGELL TRYVAEIFGP LGQYLLAGII IMACLTTTVG LTNACAEYSQ QTFRTPFAIT AIIVTAMTGV VANFGLEQIL AISLPAILIL CPVAIALVLA AWFLPTTKHN TISYVSVVMI SVVFGGLDAL HILGLLSDSL SASLTHYIPL FSAHASWFLP VVITVFISLL LNRKSSALES SN
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