179 homologs were found in PanDaTox collection
for query gene TDE1889 on replicon NC_002967
Organism: Treponema denticola ATCC 35405



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002967  TDE1889  branched-chain amino acid transport system II carrier protein  100 
 
 
462 aa  912    Treponema denticola ATCC 35405  Bacteria  unclonable  0.000000356974  n/a   
 
 
-
 
NC_010718  Nther_1076  branched-chain amino acid transport system II carrier protein  46.47 
 
 
432 aa  363  3e-99  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00600309 
 
 
-
 
NC_008262  CPR_0049  branched-chain amino acid transport system II carrier protein  42.36 
 
 
428 aa  330  4e-89  Clostridium perfringens SM101  Bacteria  normal  0.17103  n/a   
 
 
-
 
NC_008261  CPF_0050  branched-chain amino acid transport system II carrier protein  41.67 
 
 
428 aa  326  5e-88  Clostridium perfringens ATCC 13124  Bacteria  normal  0.973041  n/a   
 
 
-
 
NC_010718  Nther_2703  branched-chain amino acid transport system II carrier protein  44.34 
 
 
414 aa  313  4.999999999999999e-84  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2270  branched-chain amino acid transport system II carrier protein  41.28 
 
 
437 aa  300  4e-80  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000000730131  n/a   
 
 
-
 
NC_008262  CPR_0599  branched-chain amino acid transport system II carrier protein  40.65 
 
 
424 aa  299  6e-80  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0613  branched-chain amino acid transport system II carrier protein  41.24 
 
 
424 aa  299  8e-80  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1551  branched-chain amino acid transport system II carrier protein  37.55 
 
 
465 aa  288  1e-76  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.818102  n/a   
 
 
-
 
NC_011725  BCB4264_A2053  branched-chain amino acid transport system II carrier protein  38.13 
 
 
450 aa  278  2e-73  Bacillus cereus B4264  Bacteria  normal  0.087988  n/a   
 
 
-
 
NC_011772  BCG9842_B3254  branched-chain amino acid transport system II carrier protein  36.07 
 
 
450 aa  276  4e-73  Bacillus cereus G9842  Bacteria  normal  0.104949  normal  0.486135 
 
 
-
 
NC_010184  BcerKBAB4_1913  branched-chain amino acid transport system II carrier protein  38.13 
 
 
450 aa  276  8e-73  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0827616  n/a   
 
 
-
 
NC_011658  BCAH187_A2163  branched-chain amino acid transport system II carrier protein  38.13 
 
 
450 aa  275  8e-73  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1869  branched-chain amino acid transport system carrier protein  37.12 
 
 
448 aa  271  1e-71  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1916  branched-chain amino acid transport system II carrier protein  37.12 
 
 
448 aa  271  2e-71  Bacillus anthracis str. Sterne  Bacteria  normal  0.377142  n/a   
 
 
-
 
NC_007530  GBAA_2063  branched chain amino acid ABC transporter carrier protein  37.12 
 
 
445 aa  271  2e-71  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2095  branched-chain amino acid transport system II carrier protein  36.91 
 
 
450 aa  271  2e-71  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_1878  branched-chain amino acid transport system carrier protein  36.7 
 
 
448 aa  270  2.9999999999999997e-71  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.343185  n/a   
 
 
-
 
NC_013171  Apre_1412  branched-chain amino acid transport system II carrier protein  37.47 
 
 
441 aa  269  8.999999999999999e-71  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1729  branched-chain amino acid transport system carrier protein  35.9 
 
 
452 aa  256  4e-67  Bacillus cereus E33L  Bacteria  hitchhiker  0.0000468898  n/a   
 
 
-
 
NC_005957  BT9727_1751  branched-chain amino acid transport system carrier protein  35.9 
 
 
452 aa  255  1.0000000000000001e-66  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  1.04073e-17  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1773  branched-chain amino acid transport system II carrier protein  35.64 
 
 
452 aa  252  1e-65  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000130057  n/a   
 
 
-
 
NC_011725  BCB4264_A1915  branched-chain amino acid transport system II carrier protein  36.58 
 
 
452 aa  252  1e-65  Bacillus cereus B4264  Bacteria  normal  0.0189448  n/a   
 
 
-
 
NC_005945  BAS2920  branched-chain amino acid transport system II carrier protein  38.63 
 
 
450 aa  251  2e-65  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3142  branched chain amino acid ABC transporter carrier protein  38.63 
 
 
450 aa  251  2e-65  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.569946  n/a   
 
 
-
 
NC_011312  VSAL_I0560  branched chain amino acid transport system II carrier protein  38.03 
 
 
437 aa  249  5e-65  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3153  branched-chain amino acid transport system II carrier protein  38.63 
 
 
450 aa  249  6e-65  Bacillus cereus AH820  Bacteria  n/a    normal  0.611345 
 
 
-
 
NC_011772  BCG9842_B3429  branched-chain amino acid transport system II carrier protein  36.23 
 
 
452 aa  249  9e-65  Bacillus cereus G9842  Bacteria  hitchhiker  0.000169589  hitchhiker  0.000000128434 
 
 
-
 
NC_006274  BCZK0700  branched-chain amino acid transport protein  35.25 
 
 
438 aa  248  1e-64  Bacillus cereus E33L  Bacteria  hitchhiker  0.000173599  n/a   
 
 
-
 
NC_012793  GWCH70_3188  branched-chain amino acid transport system II carrier protein  35.7 
 
 
436 aa  249  1e-64  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.00000000414074  n/a   
 
 
-
 
NC_011725  BCB4264_A0856  branched-chain amino acid transport system II carrier protein  35.01 
 
 
438 aa  248  2e-64  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1994  branched-chain amino acid transport system II carrier protein  36.49 
 
 
452 aa  247  3e-64  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000216802  n/a   
 
 
-
 
NC_003909  BCE_2133  branched-chain amino acid transport system II carrier protein  39.32 
 
 
360 aa  247  3e-64  Bacillus cereus ATCC 10987  Bacteria  normal  0.773417  n/a   
 
 
-
 
NC_011658  BCAH187_A0966  branched-chain amino acid transport system II carrier protein  35.16 
 
 
438 aa  246  4.9999999999999997e-64  Bacillus cereus AH187  Bacteria  unclonable  0.0000000062732  n/a   
 
 
-
 
NC_011658  BCAH187_A2016  branched-chain amino acid transport system II carrier protein  34.49 
 
 
452 aa  246  6.999999999999999e-64  Bacillus cereus AH187  Bacteria  unclonable  0.0000000186213  n/a   
 
 
-
 
NC_011773  BCAH820_1945  branched-chain amino acid transport system II carrier protein  35.68 
 
 
452 aa  246  6.999999999999999e-64  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.15478e-28 
 
 
-
 
NC_010184  BcerKBAB4_0715  branched-chain amino acid transport system II carrier protein  34.55 
 
 
438 aa  244  3e-63  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000614247  n/a   
 
 
-
 
NC_009674  Bcer98_3237  branched-chain amino acid transport system II carrier protein  33.77 
 
 
443 aa  243  5e-63  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.188718  n/a   
 
 
-
 
NC_005957  BT9727_4283  branched-chain amino acid transport system II carrier protein  35.22 
 
 
441 aa  242  1e-62  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_04390  branched-chain amino acid transport system carrier protein  32.43 
 
 
425 aa  242  1e-62  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.81441  n/a   
 
 
-
 
NC_011773  BCAH820_4663  branched-chain amino acid transport system II carrier protein  35.22 
 
 
441 aa  241  2e-62  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00341134 
 
 
-
 
NC_003909  BCE_4673  branched-chain amino acid transport system II carrier protein  35.87 
 
 
441 aa  241  2.9999999999999997e-62  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2898  branched-chain amino acid transport system carrier protein  35.85 
 
 
450 aa  240  5e-62  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00345664  n/a   
 
 
-
 
NC_009656  PSPA7_3684  branched chain amino acid ABC transporter  34.1 
 
 
548 aa  239  9e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1565  branched-chain amino acid transport system II carrier protein  34.66 
 
 
451 aa  239  1e-61  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00000310033  n/a   
 
 
-
 
NC_005945  BAS0765  branched-chain amino acid transport system II carrier protein  35.36 
 
 
438 aa  239  1e-61  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000513379  n/a   
 
 
-
 
NC_007530  GBAA_0802  branched chain amino acid ABC transporter carrier protein  35.36 
 
 
438 aa  239  1e-61  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00000000325233  n/a   
 
 
-
 
NC_011773  BCAH820_0898  branched-chain amino acid transport system II carrier protein  35.13 
 
 
438 aa  238  2e-61  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.00389e-42 
 
 
-
 
NC_006274  BCZK4294  branched-chain amino acid transport system II carrier protein  35.65 
 
 
441 aa  238  2e-61  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0193  branched chain amino acid transport system II carrier protein  36.54 
 
 
437 aa  238  2e-61  Vibrio cholerae O395  Bacteria  normal  0.820087  n/a   
 
 
-
 
NC_008463  PA14_43920  branched chain amino acid transporter  33.64 
 
 
437 aa  237  3e-61  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0655  branched-chain amino acid transport system II carrier protein  35.07 
 
 
438 aa  237  3e-61  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.474851  n/a   
 
 
-
 
NC_005945  BAS4445  branched-chain amino acid transport system II carrier protein  36.14 
 
 
441 aa  236  6e-61  Bacillus anthracis str. Sterne  Bacteria  normal  0.36166  n/a   
 
 
-
 
NC_007530  GBAA_4790  branched chain amino acid ABC transporter carrier protein  36.14 
 
 
441 aa  236  6e-61  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1365  branched-chain amino acid transport system II carrier protein  34.11 
 
 
451 aa  236  8e-61  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00132143  n/a   
 
 
-
 
NC_013162  Coch_1310  branched-chain amino acid transport system II carrier protein  35.48 
 
 
434 aa  236  9e-61  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.976834  n/a   
 
 
-
 
NC_011772  BCG9842_B4480  branched-chain amino acid transport system II carrier protein  34.74 
 
 
438 aa  235  1.0000000000000001e-60  Bacillus cereus G9842  Bacteria  normal  normal  0.137842 
 
 
-
 
NC_010184  BcerKBAB4_4378  branched-chain amino acid transport system II carrier protein  35.57 
 
 
441 aa  235  1.0000000000000001e-60  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1603  branched-chain amino acid transport system II carrier protein  34.81 
 
 
451 aa  235  1.0000000000000001e-60  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000188549  n/a   
 
 
-
 
NC_003909  BCE_0894  branched-chain amino acid transport system II carrier protein  35.13 
 
 
438 aa  234  3e-60  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000586309  n/a   
 
 
-
 
NC_005957  BT9727_0713  branched-chain amino acid transport protein  34.89 
 
 
438 aa  233  4.0000000000000004e-60  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  2.39316e-17  n/a   
 
 
-
 
NC_013171  Apre_1589  branched-chain amino acid transport system II carrier protein  33.95 
 
 
447 aa  233  6e-60  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004443  branched-chain amino acid transport system carrier protein  34.64 
 
 
436 aa  232  8.000000000000001e-60  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1323  branched-chain amino acid transport protein  33.97 
 
 
451 aa  232  1e-59  Bacillus cereus E33L  Bacteria  decreased coverage  0.00120773  n/a   
 
 
-
 
NC_011725  BCB4264_A1497  branched-chain amino acid transport system II carrier protein  34.18 
 
 
451 aa  231  1e-59  Bacillus cereus B4264  Bacteria  unclonable  0.0000870089  n/a   
 
 
-
 
NC_011725  BCB4264_A4660  branched-chain amino acid transport system II carrier protein  35.68 
 
 
441 aa  232  1e-59  Bacillus cereus B4264  Bacteria  normal  0.604573  n/a   
 
 
-
 
NC_005957  BT9727_1324  branched-chain amino acid transport protein  33.97 
 
 
451 aa  231  2e-59  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000000172075  n/a   
 
 
-
 
NC_008599  CFF8240_1152  branched-chain amino acid transport system II carrier protein  32.96 
 
 
434 aa  231  2e-59  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.291372  n/a   
 
 
-
 
NC_011772  BCG9842_B0578  branched-chain amino acid transport system II carrier protein  35.54 
 
 
441 aa  231  2e-59  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2498  branched-chain amino acid transport system II carrier protein  36.8 
 
 
437 aa  231  2e-59  Pseudomonas mendocina ymp  Bacteria  normal  0.331302  normal  0.203368 
 
 
-
 
NC_005945  BAS1350  branched-chain amino acid transport system II carrier protein  33.97 
 
 
451 aa  231  3e-59  Bacillus anthracis str. Sterne  Bacteria  normal  0.0128918  n/a   
 
 
-
 
NC_011773  BCAH820_1533  branched-chain amino acid transport system II carrier protein  33.97 
 
 
451 aa  231  3e-59  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.93507e-19 
 
 
-
 
NC_007530  GBAA_1459  branched chain amino acid ABC transporter carrier protein  33.97 
 
 
451 aa  231  3e-59  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.210353  n/a   
 
 
-
 
NC_011658  BCAH187_A4676  branched-chain amino acid transport system II carrier protein  35.22 
 
 
441 aa  229  6e-59  Bacillus cereus AH187  Bacteria  hitchhiker  0.000102787  n/a   
 
 
-
 
NC_011772  BCG9842_B3847  branched-chain amino acid transport system II carrier protein  34.56 
 
 
448 aa  228  2e-58  Bacillus cereus G9842  Bacteria  hitchhiker  0.00000203183  hitchhiker  0.00000000239284 
 
 
-
 
NC_009783  VIBHAR_00954  hypothetical protein  36.54 
 
 
473 aa  228  2e-58  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_1468  branched-chain amino acid transport system II carrier protein  33.68 
 
 
447 aa  227  3e-58  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1497  branched-chain amino acid transport system II carrier protein  33.68 
 
 
447 aa  227  3e-58  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.120908  n/a   
 
 
-
 
NC_011149  SeAg_B0438  branched-chain amino acid transport system II carrier protein  33.41 
 
 
439 aa  223  4.9999999999999996e-57  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0438  branched-chain amino acid transport system II carrier protein  33.18 
 
 
439 aa  223  4.9999999999999996e-57  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.54427  normal 
 
 
-
 
NC_010498  EcSMS35_0432  branched-chain amino acid transport system II carrier protein  34.89 
 
 
439 aa  223  6e-57  Escherichia coli SMS-3-5  Bacteria  normal  0.922576  normal 
 
 
-
 
NC_011094  SeSA_A0457  branched-chain amino acid transport system II carrier protein  33.18 
 
 
439 aa  223  7e-57  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0499  branched-chain amino acid transport system II carrier protein  33.18 
 
 
439 aa  223  7e-57  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0444  branched-chain amino acid transport system II carrier protein  33.18 
 
 
439 aa  223  7e-57  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_00349  predicted branched chain amino acid transporter (LIV-II)  34.62 
 
 
439 aa  222  9e-57  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3208  branched-chain amino acid transport system II carrier protein  34.62 
 
 
439 aa  222  9e-57  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00353  hypothetical protein  34.62 
 
 
439 aa  222  9e-57  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0478  branched-chain amino acid transport system II carrier protein  34.62 
 
 
439 aa  222  9e-57  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.709941  normal 
 
 
-
 
NC_010658  SbBS512_E0320  branched-chain amino acid transport system II carrier protein  34.62 
 
 
439 aa  222  9e-57  Shigella boydii CDC 3083-94  Bacteria  normal  0.259108  n/a   
 
 
-
 
NC_010468  EcolC_3232  branched-chain amino acid transport system II carrier protein  34.62 
 
 
439 aa  222  9e-57  Escherichia coli ATCC 8739  Bacteria  normal  0.686325  unclonable  0.0000000117832 
 
 
-
 
NC_009800  EcHS_A0471  branched-chain amino acid transport system II carrier protein  34.62 
 
 
439 aa  222  9e-57  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0431  branched-chain amino acid transport system II carrier protein  34.62 
 
 
439 aa  222  9e-57  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3325  branched-chain amino acid transport system II carrier protein  32.35 
 
 
437 aa  222  9.999999999999999e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.106259  n/a   
 
 
-
 
NC_012793  GWCH70_1435  branched-chain amino acid transport system II carrier protein  35.44 
 
 
420 aa  221  1.9999999999999999e-56  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000424202  n/a   
 
 
-
 
NC_009674  Bcer98_1161  branched-chain amino acid transport system II carrier protein  33.41 
 
 
451 aa  221  1.9999999999999999e-56  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.328055  n/a   
 
 
-
 
NC_008309  HS_1492  branched-chain amino acid carrier protein  38.86 
 
 
438 aa  220  3e-56  Haemophilus somnus 129PT  Bacteria  normal  0.221631  n/a   
 
 
-
 
NC_012912  Dd1591_3102  branched-chain amino acid transport system II carrier protein  31.95 
 
 
440 aa  220  3.9999999999999997e-56  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3755  branched-chain amino acid transport system II carrier protein  32.11 
 
 
437 aa  220  5e-56  Pseudomonas putida GB-1  Bacteria  normal  0.642485  normal 
 
 
-
 
NC_008463  PA14_39050  branched-chain amino acid transport carrier  33.03 
 
 
437 aa  219  6e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.379222  normal  0.362487 
 
 
-
 
NC_002947  PP_4184  branched chain amino acid ABC transporter carrier protein  31.88 
 
 
437 aa  219  7.999999999999999e-56  Pseudomonas putida KT2440  Bacteria  normal  0.579709  normal 
 
 
-
 
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