| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0050 |
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| Symbol | brnQ |
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| ID | 4201771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 55675 |
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| End bp | 56961 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638080925 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_694516 |
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| Protein GI | 110800785 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.973041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAAAA AGAAAGATAT ATTAGTAATA GGATTTGCCT TATTCTCTAT ATTCTTTGGG
GCTGGAAACC TAATATTTCC TCCATACATA GGATTAACAT CAGGAAGTGA ATGGTTAATT
AGTTTTTTAG GATTTATAAT ATCAGACGTA GGAATAATAT TTTTATCAAT AGTTGCAGTT
TCTAAGGCTG GATCTTTCCA AGGGGTTGTT GGAAGAGCAG GTAAAAAGTT TGGTATTACC
TTAGAAATTT TAATGATGCT ATGCTTAGGA CCTATATTAG TAGTGCCAAG GACTGCGGCA
ACAACATTTG AAATGAGTAT TTCTCCACTT TTAGGAAATG TAAATCCATA TGTATTTTCA
GTAATATTCT TTTTAATAGT TTTTGTGCTA ACAATAAAGC CTAATAAGGT TATGGATATA
ATCGGAAAGG TTCTAACACC ATTATTACTT ATATCATTAG CAGTATTAAT AATAAAGGGA
ATTATAAATC CTATTGGAGA TTTAGAAAAA GTTAATTCAG GTAAGTTATT TATGACTGGG
ATTACTCAAG GATATCAAAC AATGGATGCT TTAGGAACTG GAGGAATTGT AGCACTTGTT
ATGGCTTCAT TTGCAAGTAA AGGCTATAAG GACAAAAAAG AAAATAGAAT GCTTACAATA
AAATCTGCCT TAATTGCATG TATTGGACTA GCTATTGTTT ATGGAGGATT AACATTCTTA
GGGGCTACAT CTTCAACTTT ATATGATAGC AGTATTTCAC AAACAACATT ACTTATGAAT
ATAACTAATG CAATTTTAGG GTCAACAGGT ACTATTATGT TAGCAATAGT AATAGGACTT
GCTTGTCTTA CAACGGCTGT AGGATTAACT TCTGTTACAG CTAAATACTT TGAAGATGTA
TCTAACAAAA AATTAAAATA CAAATATATA GTAATAGCAA TATGTGTATT TAGTGCATTA
TCTTCTAATT TAGGAGTAGA TAAAATAATA GAAATTGCAG TACCTGTATT AAGCTTAATT
TATCCAGTTT CTATATTATT AGTAGTAATG AGTATATTTG AAAAATTCGT TCCAAATAAT
GTAGTGGTAA AGGGAGCTAC TTATGCAACT CTTTTAATAA GCTTACTTAC TGTAATTGAT
AGCTTAGGAA TAAAATTTGA ATTTGTTCAT AAGTTGCCTC TTGCAAACCT AGGATTTAAC
TGGGTTGTTC CAGCTATAGT TGGAGGCTTA ATAGCAGGGT TAGTATTTAG AAAAAGAGAA
GTTGTATCTT TAGAAGAATC ATATTAA
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| Protein sequence | MNKKKDILVI GFALFSIFFG AGNLIFPPYI GLTSGSEWLI SFLGFIISDV GIIFLSIVAV
SKAGSFQGVV GRAGKKFGIT LEILMMLCLG PILVVPRTAA TTFEMSISPL LGNVNPYVFS
VIFFLIVFVL TIKPNKVMDI IGKVLTPLLL ISLAVLIIKG IINPIGDLEK VNSGKLFMTG
ITQGYQTMDA LGTGGIVALV MASFASKGYK DKKENRMLTI KSALIACIGL AIVYGGLTFL
GATSSTLYDS SISQTTLLMN ITNAILGSTG TIMLAIVIGL ACLTTAVGLT SVTAKYFEDV
SNKKLKYKYI VIAICVFSAL SSNLGVDKII EIAVPVLSLI YPVSILLVVM SIFEKFVPNN
VVVKGATYAT LLISLLTVID SLGIKFEFVH KLPLANLGFN WVVPAIVGGL IAGLVFRKRE
VVSLEESY
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