| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0599 |
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| Symbol | brnQ |
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| ID | 4204941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 717556 |
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| End bp | 718830 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565159 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_697926 |
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| Protein GI | 110801971 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAACA AAAAATCAGA TTTTTTAATA ATCGGATTTG CACTATTCTC AATGTTTTTA
GGGGCTGGTA ACCTTATTTT CCCACCTTTA TTAGGAAGAA ATTTAGGTGC AGATTACTAT
TTAGGGATTA TAGGATTTAT AATAACTGGA GTTGGAGTAC CACTACTTGG TATATTATCT
TCAATGAGAG TTAACGGTAA ATTTGAATTA TTCGGAGATA AAGTAGGTAA AAAATTCTCA
TTAATATATT CAATAGCATT ATTTATACTT ATTGGACCAT TATTAGCTAT TCCTAGAACA
GCAGCTACTA CATTTGAATT AGCATTTGCT CCTAACTTTG CAAATATAAA TTACTTTGCA
GTAATAGTTG TTTACTTTTT AGTTAATTTA ATCTTTGTAT TAAAACCATC AAAAGTTATA
GATGTTTTAG GTAAATTTTT AACTCCTATA TTATTAGCTA TATTATTTTT CTTAATAGCT
AAGGGAGTTC TTAGTCCAAT AGACGCTTTA ACAAAATCAT ATACTCCTGA TGCTCTTTTT
ACATCATTAC TTGAAGGATA TCAAACAATG GATGCAATTG CAGCTGTTAT ATTCTCTTCA
ATAATATTAG GTTCAATAAA AGCTAAAGGA TATACTGGTA AAGCTAGCTT TAAATTACTT
ATTAAAGCAG CAGTTATTGC AATCGGAGGA CTAGCAATAA TTTATGGTGG ATTAATATTC
CTTGGTGCTC ATACTGGGGA TTTAGCTTTA GATTTATCAA ATTCTCAATT ATTACTTTTT
GTTGCTGAAA GTATTCTAGG ACATGCAGGT GCAATATTAA TAGGTGTATC AATGGCATTA
GCTTGTTTAA CAACTTCAAT AGGATTACTT TCTGCTGGTG GAAGTTTCTT TGAAAGAGTT
TCTAATGGTA AATTACCATA TAAATTTAAC GTTTTATTAA TGACAGTAAC TAGTATATTA
GTTGCTAGTA TGGGATTAGA TAAGATAATA TCATTATCAG CTACTTTACT TGGTGTAATC
TATCCAGTAA CAATAGTTCT TATATTATTA AACCTATTCC ATAAGAGAAT AACTAACCCA
CTTACTCATA AGGTTACTGT ATATGTTACT TTAATAGTTA GTATATTAAT AACACTAGGT
AACTCTATAC CTGGAGTAGA AAACTTAGTT TCTCTTCTTC CACTATACTC TAAGGGATTT
GGTTGGGTAG TACCTGCTTT AATAGGATTT ATAATACCAA GCATTATGCC TACAAGAGAA
ACTGCTACAG CTTAA
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| Protein sequence | MNNKKSDFLI IGFALFSMFL GAGNLIFPPL LGRNLGADYY LGIIGFIITG VGVPLLGILS
SMRVNGKFEL FGDKVGKKFS LIYSIALFIL IGPLLAIPRT AATTFELAFA PNFANINYFA
VIVVYFLVNL IFVLKPSKVI DVLGKFLTPI LLAILFFLIA KGVLSPIDAL TKSYTPDALF
TSLLEGYQTM DAIAAVIFSS IILGSIKAKG YTGKASFKLL IKAAVIAIGG LAIIYGGLIF
LGAHTGDLAL DLSNSQLLLF VAESILGHAG AILIGVSMAL ACLTTSIGLL SAGGSFFERV
SNGKLPYKFN VLLMTVTSIL VASMGLDKII SLSATLLGVI YPVTIVLILL NLFHKRITNP
LTHKVTVYVT LIVSILITLG NSIPGVENLV SLLPLYSKGF GWVVPALIGF IIPSIMPTRE
TATA
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