| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0049 |
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| Symbol | brnQ |
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| ID | 4205565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 55466 |
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| End bp | 56752 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642564592 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_697391 |
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| Protein GI | 110802801 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.17103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA AGAAAGATAT ATTAGTAATA GGATTTGCCT TATTCTCTAT ATTCTTTGGG
GCTGGAAATC TAATATTTCC TCCATACATA GGATTAACAT CAGGAAGTGA ATGGTTAATT
AGTTTTTTAG GATTTATAAT ATCAGACGTA GGAATAATAT TTTTATCAAT AGTTGCAGTT
TCTAAGGCAG GATCTTTCCA AGGTGTTGTT GGAAGAGCAG GTAAGAAGTT TGGACTTTCC
TTAGAAATTT TAATGATGTT ATGCTTAGGA CCTATATTAG TAGTGCCAAG GACTGCAGCA
ACAACATTTG AAATGAGTAT TTCTCCACTT TTAGGAAATA TAAATCCATA TTTATTTTCA
GTAATATTCT TTTTAATAGT TTTTGTGCTT ACAATAAAGC CTAATAAGGT TATGGATATA
ATCGGAAAGG TTCTAACACC TTTATTACTT ATATCATTAG CAGTATTAAT AATAAAAGGA
ATTATAAATC CTATTGGAGA ATTAGAAAAA GTTAATTCAG GCAAGCTATT TATGACTGGA
ATTACTCAAG GATATCAAAC AATGGATGCT TTGGGAACTG GAGGAATTGT AGCACTTGTT
ATGGCTTCAT TTGCAAGTAA AGGATATAAG GATAAAAAAG AAAATAGAAT TCTTACAATA
AAATCTGCCT TAATTGCATG TATTGGACTA GCTATTGTTT ATGGAGGATT AACATTCTTA
GGGGCTACAT CTTCAACTTT ATATGATAGC AGTATTTCAC AAACAACATT ACTTATGAAT
ATAACTAATG CAATTTTAGG GTCAACAGGT ACTATTATGT TAGCAATAGT AATAGGACTT
GCTTGTCTTA CAACGGCTGT AGGATTAACT TCTGTTACGG CTAAATATTT TGAAGATGTA
TCTAACAAAA AATTAAAATA CAAATATATA GTAATAGCAA TATGTGTATT TAGTGCATTA
GCTTCTAATT TAGGAGTAGA TAAAATAATA GAAATTGCAG TACCTGTACT AAGTTTAATT
TATCCAATTT CTATATTATT AGTAGTAATG AATATATTTG AAAAATTCAT TCCAAATGAT
GTAGTGGTAA AGGGAGCTAC TTATGCAACT CTTTTAATAA GCTTACTTAC TGTAATTGAT
AGCTTAGGAA TAAAGTTTGA ATTTGTTCAT AAGTTACCTC TTGCAAACCT AGGATTTAAC
TGGGTTGTTC CAGCTATAGT TGGAGGATTA ATAGCAGGGT TAGTATTTAG AAAAAGAGAA
GTTGTATCTT TAGAAGAAAA TTGTTAA
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| Protein sequence | MNKKKDILVI GFALFSIFFG AGNLIFPPYI GLTSGSEWLI SFLGFIISDV GIIFLSIVAV
SKAGSFQGVV GRAGKKFGLS LEILMMLCLG PILVVPRTAA TTFEMSISPL LGNINPYLFS
VIFFLIVFVL TIKPNKVMDI IGKVLTPLLL ISLAVLIIKG IINPIGELEK VNSGKLFMTG
ITQGYQTMDA LGTGGIVALV MASFASKGYK DKKENRILTI KSALIACIGL AIVYGGLTFL
GATSSTLYDS SISQTTLLMN ITNAILGSTG TIMLAIVIGL ACLTTAVGLT SVTAKYFEDV
SNKKLKYKYI VIAICVFSAL ASNLGVDKII EIAVPVLSLI YPISILLVVM NIFEKFIPND
VVVKGATYAT LLISLLTVID SLGIKFEFVH KLPLANLGFN WVVPAIVGGL IAGLVFRKRE
VVSLEENC
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