| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1310 |
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| Symbol | |
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| ID | 8367741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1523506 |
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| End bp | 1524810 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644983737 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_003141417 |
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| Protein GI | 256820138 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.976834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATCATA TTCGTAAAAG CAAATGGAAA ACTATTACCA CCGTAGGCTT CGCTTTATTT
GCGATGTTCT TTGGGGCGGG TAATCTTATA TTACCTCCGT TCATAGGTTT AAGAACGGAA
GGGGAATGGG GTATGGCGTT GTTAGGCTTT TTTATCACCG CTATTTTAGC TCCTTTTTTA
GGGGTGTTAA TGGTGGCTAA AACGGGCACT CACTTCACTG ATTTAGGGAA GAAAACGCAC
CCTTGGCTCA TTAAAATCCT TACGTTATTA GTTATTTTAT GCATAGGTCC TTTGGTAGCT
ATCCCACGCA CCGCTGCTAC TACTTTTGAA GTAGGCATAC AACCCTTATT ACCTGCTTTT
CCTAAGGTGT GGTTCATCGT TTTATTCTTT GCCGTTGTAA CCGCTTTATC TATATCGAAA
TCCAAGATTG TAAGCATTAT AGGCAGGTTT CTCACTCCTT TTCTGCTGAT AGTTTTAGTA
CTGCTTATTG TTTTAGGCGT ATGCTTTCCC CCAGATAGTA TTACCTCTAC GGCATTTACC
GCCACTGAAA GCTTTTCCTT AGGTTTCTTA GAAGGCTACC AAACAATGGA TTTGTTGGCT
TCGGTCATCT TTGCAGGTAT TGTTATTGCA GCAGTAATAG ATAGTGGCTA TACCTCACGC
AATGAGCGTG TTTCTGTTAC TTTTGCAGCA GGAATGCTTT CTACGCTCTG TTTGTTGTTT
ATTTATGGAG GGCTTATTTA CTTAGGCGCC ACTACCGATT ACCCCTTAAC TGATAGCGTA
CAACGCACTG AACTTCTGTT ACACATTTCT CATTCTGTTT TAGGAAAATG GGGTACTATC
ACTGTTGCCT TAGCTATTGG GTTTGCTTGT CTTACAACCG CTATTGCTCT TACATCGGCA
GTGGGCTTGT TCTTTGAAGA AGTAACTCAT CAACGCGTCC CGTACAAAGT AGGTGCTATA
GTCTGTACGC TCATTTCAGT AGTATTATCA ATTAACACGG TGGATAATAT CATCAACTAT
GCGATTTATA TTCTGCTATT TATATACCCC ATAGTCTCTA CTCTCATTAT AACCGTTTTA
TTCTTCGACC GCTTTGTAAA TAGCAAATTA CCCTATATTT TAAGCATATT GGTCACTGCT
ATTATTTCCA CTATTGATAG CTGTCAAACA TTAGGACTAC CCTTTGATAA GCTTTATGAA
ATTAAAAGCC TATTACCTTT GAGCGATTAC GGTTTAGAAT GGTTTTTACC TGCTTTGCTA
ACTTTTATTA TTACAGCTTT CATGAAAGGC TTTAAGAAGA AATAA
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| Protein sequence | MHHIRKSKWK TITTVGFALF AMFFGAGNLI LPPFIGLRTE GEWGMALLGF FITAILAPFL
GVLMVAKTGT HFTDLGKKTH PWLIKILTLL VILCIGPLVA IPRTAATTFE VGIQPLLPAF
PKVWFIVLFF AVVTALSISK SKIVSIIGRF LTPFLLIVLV LLIVLGVCFP PDSITSTAFT
ATESFSLGFL EGYQTMDLLA SVIFAGIVIA AVIDSGYTSR NERVSVTFAA GMLSTLCLLF
IYGGLIYLGA TTDYPLTDSV QRTELLLHIS HSVLGKWGTI TVALAIGFAC LTTAIALTSA
VGLFFEEVTH QRVPYKVGAI VCTLISVVLS INTVDNIINY AIYILLFIYP IVSTLIITVL
FFDRFVNSKL PYILSILVTA IISTIDSCQT LGLPFDKLYE IKSLLPLSDY GLEWFLPALL
TFIITAFMKG FKKK
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