| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_0171 |
|---|
| Symbol | |
|---|
| ID | 5168227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009487 |
|---|
| Strand | - |
|---|
| Start bp | 204432 |
|---|
| End bp | 205781 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640564501 |
|---|
| Product | branched-chain amino acid transport system II carrier protein |
|---|
| Protein accession | YP_001245554 |
|---|
| Protein GI | 148266611 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1114] Branched-chain amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA AACTAACATT TAAAGAAAAC ATGTTTATAG GTTCTATGTT ATTTGGTTTA
TTCTTTGGTG CCGGCAATCT TATCTTCCCA ATACACTTGG GTCAAGCTGC TGGTTCTAAC
GTTTTTATCG CTAACTTAGG ATTTTTAATT ACAGCAATTG GCTTACCATT TCTAGGTATC
ATTGCTATTG GCATTTCAAA GACATCTGGT TTATTTGAAA TTGCATCGCG TGTTAATAAA
ACATATGCTT ACATTTTCAC GATTGCCTTA TATCTAGTTA TCGGACCATT TTTCGCCTTA
CCTAGACTGG CAACGACATC ATTTGAAATT GCATTTTCGC CATTTTTATC ACCAAAGCAA
ATCACTTTAT ATTTATTTAT TTTTAGCTTC GTCTTCTTTG TGATTGCATG GTTTTTTGCG
AGAAAGCCAT CAAGAATTTT AGAATATATC GGTAAATTTT TAAATCCGGT ATTCTTAGTA
TTATTAGCAA TTATTTTATT ATTTGCTTTT ATCCATCCAT TAGGTGGCAT ATCTGATGCA
CCTATTAGTA AACAATATCA ATCACATGCC TTATTTAACG GCTTTTTAGA TGGATACAAT
ACCTTAGATG CGCTAGCGTC ATTGGCATTT GGTATCATCA TTGTTGCAAC GATTAAAAAG
TTAGGTATCG AAAATCCAAC TGATATCGCT AAAGAAACAA TTAAGTCTGG TACTATCAGT
ATCATTATGA TGGGGATTAT TTATACCCTA CTAGCAATCA TGGGTACATT AAGTATTGGT
CATTTCAAAC TTAGTGAAAA TGGTGGTATT GCCTTAGCGC AAATTACGCA ATACTACTTA
GGTAACTACG GTATCGTCCT GTTGTCACTT ATCGTTATGG TTGCTTGTTT AAAAACAGCC
ATCGGTTTGA TTACGGCATT TTCAGAAACA TTCGAACACC TTTTCCCTAA AATGAATTAC
CTAGCGATTG CAACAGTTGT AAGCTTTATT TCGTTCTTAT TCGCGAATGT TGGCTTAACT
AAGATTATTA TGTACTCAGT CCCAGTGTTA ATGTTCTTAT ATCCATTAGC AATTGCCTTG
ATTGTACTAA CATTATTTAG TAGCAAATTC CATCATTCAA AAATTATTTA TCAATGTACC
ATTTTCTTTA CAATGATTGC TGCATTAGTA GATGGATTAA AAGCTAGTCC AGAGTTCATT
TCAAGCACAT CATTCTCACA AACTTTGATT AATTTCAGCC AAAAATATTT ACCATTATCA
GACATTGGTA TGGGCTGGGT TGTTCTCAGT TTGATTGGTT TCATTATCGG CTTCATTATT
TATAAAATTA AGCATCGTAA AATTCCATAA
|
|---|
| Protein sequence | MKKKLTFKEN MFIGSMLFGL FFGAGNLIFP IHLGQAAGSN VFIANLGFLI TAIGLPFLGI
IAIGISKTSG LFEIASRVNK TYAYIFTIAL YLVIGPFFAL PRLATTSFEI AFSPFLSPKQ
ITLYLFIFSF VFFVIAWFFA RKPSRILEYI GKFLNPVFLV LLAIILLFAF IHPLGGISDA
PISKQYQSHA LFNGFLDGYN TLDALASLAF GIIIVATIKK LGIENPTDIA KETIKSGTIS
IIMMGIIYTL LAIMGTLSIG HFKLSENGGI ALAQITQYYL GNYGIVLLSL IVMVACLKTA
IGLITAFSET FEHLFPKMNY LAIATVVSFI SFLFANVGLT KIIMYSVPVL MFLYPLAIAL
IVLTLFSSKF HHSKIIYQCT IFFTMIAALV DGLKASPEFI SSTSFSQTLI NFSQKYLPLS
DIGMGWVVLS LIGFIIGFII YKIKHRKIP
|
|---|
| |