179 homologs were found in PanDaTox collection
for query gene SERP2363 on replicon NC_002976
Organism: Staphylococcus epidermidis RP62A



Page 1 of 2    << first  < prev  1  2    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002976  SERP2363  branched-chain amino acid transport system II carrier protein  100 
 
 
452 aa  880    Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0171  branched-chain amino acid transport system II carrier protein  73.6 
 
 
449 aa  620  1e-176  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0176  branched-chain amino acid transport system II carrier protein  73.6 
 
 
449 aa  620  1e-176  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0712  branched-chain amino acid permease  63.43 
 
 
449 aa  510  1e-143  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0751355  n/a   
 
 
-
 
NC_013721  HMPREF0424_0196  branched-chain amino acid transport system II carrier protein  45.9 
 
 
523 aa  384  1e-105  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008530  LGAS_0948  branched-chain amino acid permease  45.76 
 
 
475 aa  374  1e-102  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_0050  branched-chain amino acid permease  43.56 
 
 
454 aa  372  1e-101  Lactobacillus gasseri ATCC 33323  Bacteria  unclonable  0.0000000000377191  normal 
 
 
-
 
NC_009513  Lreu_1811  branched-chain amino acid transport system II carrier protein  45.94 
 
 
461 aa  356  3.9999999999999996e-97  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000000231514  n/a   
 
 
-
 
NC_005957  BT9727_1751  branched-chain amino acid transport system carrier protein  43.3 
 
 
452 aa  353  2.9999999999999997e-96  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  1.04073e-17  n/a   
 
 
-
 
NC_006274  BCZK1729  branched-chain amino acid transport system carrier protein  43.3 
 
 
452 aa  353  4e-96  Bacillus cereus E33L  Bacteria  hitchhiker  0.0000468898  n/a   
 
 
-
 
NC_011773  BCAH820_1945  branched-chain amino acid transport system II carrier protein  43.3 
 
 
452 aa  345  8e-94  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.15478e-28 
 
 
-
 
NC_010184  BcerKBAB4_1773  branched-chain amino acid transport system II carrier protein  43.25 
 
 
452 aa  344  2e-93  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000130057  n/a   
 
 
-
 
NC_005945  BAS2920  branched-chain amino acid transport system II carrier protein  43.74 
 
 
450 aa  343  2.9999999999999997e-93  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3142  branched chain amino acid ABC transporter carrier protein  43.74 
 
 
450 aa  343  2.9999999999999997e-93  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.569946  n/a   
 
 
-
 
NC_011773  BCAH820_3153  branched-chain amino acid transport system II carrier protein  43.52 
 
 
450 aa  342  1e-92  Bacillus cereus AH820  Bacteria  n/a    normal  0.611345 
 
 
-
 
NC_005957  BT9727_2898  branched-chain amino acid transport system carrier protein  43.08 
 
 
450 aa  335  1e-90  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00345664  n/a   
 
 
-
 
NC_011725  BCB4264_A1915  branched-chain amino acid transport system II carrier protein  43.48 
 
 
452 aa  335  1e-90  Bacillus cereus B4264  Bacteria  normal  0.0189448  n/a   
 
 
-
 
NC_008531  LEUM_1440  branched-chain amino acid permease  40.72 
 
 
450 aa  335  1e-90  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1681  branched-chain amino acid transport system II carrier protein  40.22 
 
 
450 aa  333  3e-90  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3429  branched-chain amino acid transport system II carrier protein  43.49 
 
 
452 aa  332  9e-90  Bacillus cereus G9842  Bacteria  hitchhiker  0.000169589  hitchhiker  0.000000128434 
 
 
-
 
NC_003909  BCE_1994  branched-chain amino acid transport system II carrier protein  43.72 
 
 
452 aa  331  1e-89  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000216802  n/a   
 
 
-
 
NC_011658  BCAH187_A2016  branched-chain amino acid transport system II carrier protein  43.72 
 
 
452 aa  330  3e-89  Bacillus cereus AH187  Bacteria  unclonable  0.0000000186213  n/a   
 
 
-
 
NC_008528  OEOE_0443  branched-chain amino acid permease  39.78 
 
 
482 aa  328  8e-89  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_15150  branched-chain amino acid uptake carrier  42.05 
 
 
464 aa  318  1e-85  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_14620  branched-chain amino acid uptake carrier  40.35 
 
 
461 aa  315  7e-85  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.72122  normal  0.302193 
 
 
-
 
NC_011772  BCG9842_B3254  branched-chain amino acid transport system II carrier protein  39.65 
 
 
450 aa  310  5e-83  Bacillus cereus G9842  Bacteria  normal  0.104949  normal  0.486135 
 
 
-
 
NC_011725  BCB4264_A2053  branched-chain amino acid transport system II carrier protein  39.21 
 
 
450 aa  309  8e-83  Bacillus cereus B4264  Bacteria  normal  0.087988  n/a   
 
 
-
 
NC_011658  BCAH187_A2163  branched-chain amino acid transport system II carrier protein  39.21 
 
 
450 aa  308  2.0000000000000002e-82  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1913  branched-chain amino acid transport system II carrier protein  39.21 
 
 
450 aa  303  5.000000000000001e-81  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0827616  n/a   
 
 
-
 
NC_009674  Bcer98_1551  branched-chain amino acid transport system II carrier protein  38.72 
 
 
465 aa  302  6.000000000000001e-81  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.818102  n/a   
 
 
-
 
NC_005945  BAS1916  branched-chain amino acid transport system II carrier protein  39.65 
 
 
448 aa  302  9e-81  Bacillus anthracis str. Sterne  Bacteria  normal  0.377142  n/a   
 
 
-
 
NC_007530  GBAA_2063  branched chain amino acid ABC transporter carrier protein  39.65 
 
 
445 aa  302  9e-81  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2095  branched-chain amino acid transport system II carrier protein  39.65 
 
 
450 aa  301  1e-80  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_1878  branched-chain amino acid transport system carrier protein  39.65 
 
 
448 aa  301  2e-80  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.343185  n/a   
 
 
-
 
NC_006274  BCZK1869  branched-chain amino acid transport system carrier protein  39.65 
 
 
448 aa  300  3e-80  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1365  branched-chain amino acid transport system II carrier protein  38.67 
 
 
451 aa  298  2e-79  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00132143  n/a   
 
 
-
 
NC_008262  CPR_0388  branched-chain amino acid transport system II carrier protein  39.86 
 
 
445 aa  296  5e-79  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0392  branched-chain amino acid transport system II carrier protein  39.63 
 
 
445 aa  294  2e-78  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1161  branched-chain amino acid transport system II carrier protein  37.95 
 
 
451 aa  288  2e-76  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.328055  n/a   
 
 
-
 
NC_011658  BCAH187_A1603  branched-chain amino acid transport system II carrier protein  37.42 
 
 
451 aa  283  3.0000000000000004e-75  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000188549  n/a   
 
 
-
 
NC_005957  BT9727_1324  branched-chain amino acid transport protein  37.19 
 
 
451 aa  283  4.0000000000000003e-75  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000000172075  n/a   
 
 
-
 
NC_011773  BCAH820_1533  branched-chain amino acid transport system II carrier protein  37.19 
 
 
451 aa  283  6.000000000000001e-75  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.93507e-19 
 
 
-
 
NC_006274  BCZK1323  branched-chain amino acid transport protein  37.19 
 
 
451 aa  282  7.000000000000001e-75  Bacillus cereus E33L  Bacteria  decreased coverage  0.00120773  n/a   
 
 
-
 
NC_003909  BCE_2133  branched-chain amino acid transport system II carrier protein  42.74 
 
 
360 aa  281  1e-74  Bacillus cereus ATCC 10987  Bacteria  normal  0.773417  n/a   
 
 
-
 
NC_011772  BCG9842_B3847  branched-chain amino acid transport system II carrier protein  37.33 
 
 
448 aa  281  2e-74  Bacillus cereus G9842  Bacteria  hitchhiker  0.00000203183  hitchhiker  0.00000000239284 
 
 
-
 
NC_005945  BAS1350  branched-chain amino acid transport system II carrier protein  36.89 
 
 
451 aa  280  5e-74  Bacillus anthracis str. Sterne  Bacteria  normal  0.0128918  n/a   
 
 
-
 
NC_007530  GBAA_1459  branched chain amino acid ABC transporter carrier protein  36.89 
 
 
451 aa  280  5e-74  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.210353  n/a   
 
 
-
 
NC_012793  GWCH70_3188  branched-chain amino acid transport system II carrier protein  36.2 
 
 
436 aa  279  9e-74  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.00000000414074  n/a   
 
 
-
 
NC_003909  BCE_1565  branched-chain amino acid transport system II carrier protein  37.19 
 
 
451 aa  278  1e-73  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00000310033  n/a   
 
 
-
 
NC_003909  BCE_4673  branched-chain amino acid transport system II carrier protein  37.64 
 
 
441 aa  276  5e-73  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1497  branched-chain amino acid transport system II carrier protein  36.97 
 
 
451 aa  276  6e-73  Bacillus cereus B4264  Bacteria  unclonable  0.0000870089  n/a   
 
 
-
 
NC_005957  BT9727_4283  branched-chain amino acid transport system II carrier protein  37.42 
 
 
441 aa  270  2.9999999999999997e-71  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4663  branched-chain amino acid transport system II carrier protein  37.42 
 
 
441 aa  269  5.9999999999999995e-71  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00341134 
 
 
-
 
NC_010184  BcerKBAB4_4378  branched-chain amino acid transport system II carrier protein  36.97 
 
 
441 aa  266  4e-70  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3237  branched-chain amino acid transport system II carrier protein  37.22 
 
 
443 aa  265  8e-70  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.188718  n/a   
 
 
-
 
NC_011658  BCAH187_A4676  branched-chain amino acid transport system II carrier protein  37.64 
 
 
441 aa  265  2e-69  Bacillus cereus AH187  Bacteria  hitchhiker  0.000102787  n/a   
 
 
-
 
NC_008599  CFF8240_1152  branched-chain amino acid transport system II carrier protein  33.93 
 
 
434 aa  263  3e-69  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.291372  n/a   
 
 
-
 
NC_011312  VSAL_I0560  branched chain amino acid transport system II carrier protein  36.14 
 
 
437 aa  264  3e-69  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1182  branched-chain amino acid transport system II carrier protein  35.12 
 
 
440 aa  263  4.999999999999999e-69  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4294  branched-chain amino acid transport system II carrier protein  37.42 
 
 
441 aa  262  1e-68  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004443  branched-chain amino acid transport system carrier protein  36.5 
 
 
436 aa  260  4e-68  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2270  branched-chain amino acid transport system II carrier protein  36.59 
 
 
437 aa  259  5.0000000000000005e-68  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000000730131  n/a   
 
 
-
 
NC_011725  BCB4264_A4660  branched-chain amino acid transport system II carrier protein  37.35 
 
 
441 aa  259  7e-68  Bacillus cereus B4264  Bacteria  normal  0.604573  n/a   
 
 
-
 
NC_005945  BAS0656  branched-chain amino acid transport system II carrier protein  36.55 
 
 
433 aa  259  8e-68  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.000000375025  n/a   
 
 
-
 
NC_007530  GBAA_0690  branched chain amino acid ABC transporter carrier protein  36.55 
 
 
433 aa  259  8e-68  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00000770045  n/a   
 
 
-
 
NC_012793  GWCH70_1435  branched-chain amino acid transport system II carrier protein  36.47 
 
 
420 aa  258  1e-67  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000424202  n/a   
 
 
-
 
NC_011772  BCG9842_B0578  branched-chain amino acid transport system II carrier protein  36.66 
 
 
441 aa  258  2e-67  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0600  branched-chain amino acid transport system II carrier protein  36.55 
 
 
433 aa  258  2e-67  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  2.7393400000000002e-18  n/a   
 
 
-
 
NC_011773  BCAH820_0745  branched-chain amino acid transport system II carrier protein  36.55 
 
 
433 aa  257  3e-67  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000572919 
 
 
-
 
NC_009457  VC0395_A0193  branched chain amino acid transport system II carrier protein  38.28 
 
 
437 aa  257  3e-67  Vibrio cholerae O395  Bacteria  normal  0.820087  n/a   
 
 
-
 
NC_005945  BAS4445  branched-chain amino acid transport system II carrier protein  37.27 
 
 
441 aa  256  6e-67  Bacillus anthracis str. Sterne  Bacteria  normal  0.36166  n/a   
 
 
-
 
NC_007530  GBAA_4790  branched chain amino acid ABC transporter carrier protein  37.27 
 
 
441 aa  256  6e-67  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_1461  branched-chain amino acid transport system II carrier protein  38.86 
 
 
435 aa  256  6e-67  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_0605  branched-chain amino acid transport system II carrier protein  36.01 
 
 
433 aa  255  1.0000000000000001e-66  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000149731  n/a   
 
 
-
 
NC_011658  BCAH187_A0818  branched-chain amino acid transport system II carrier protein  36.1 
 
 
433 aa  254  3e-66  Bacillus cereus AH187  Bacteria  decreased coverage  0.00000157021  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0715  branched-chain amino acid transport system II carrier protein  37.05 
 
 
438 aa  253  6e-66  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000614247  n/a   
 
 
-
 
NC_009997  Sbal195_3644  branched-chain amino acid transport system II carrier protein  35.4 
 
 
470 aa  253  6e-66  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3525  branched-chain amino acid transport system II carrier protein  35.4 
 
 
470 aa  253  6e-66  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00954  hypothetical protein  35.33 
 
 
473 aa  253  6e-66  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_006274  BCZK0601  branched-chain amino acid transport system II carrier protein  35.87 
 
 
433 aa  251  1e-65  Bacillus cereus E33L  Bacteria  hitchhiker  0.000000939868  n/a   
 
 
-
 
NC_003909  BCE_0759  branched-chain amino acid transport system II carrier protein  35.2 
 
 
431 aa  251  2e-65  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00000381883  n/a   
 
 
-
 
NC_009052  Sbal_0842  branched-chain amino acid transport system II carrier protein  35.18 
 
 
466 aa  250  3e-65  Shewanella baltica OS155  Bacteria  normal  0.809943  n/a   
 
 
-
 
NC_011663  Sbal223_3450  branched-chain amino acid transport system II carrier protein  35.18 
 
 
470 aa  250  4e-65  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0856  branched-chain amino acid transport system II carrier protein  36.36 
 
 
438 aa  249  6e-65  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0966  branched-chain amino acid transport system II carrier protein  36.82 
 
 
438 aa  249  7e-65  Bacillus cereus AH187  Bacteria  unclonable  0.0000000062732  n/a   
 
 
-
 
NC_008700  Sama_2740  branched-chain amino acid transport system II carrier protein BrnQ  34.62 
 
 
441 aa  249  8e-65  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0804  branched-chain amino acid transport system II carrier protein  34.86 
 
 
448 aa  248  1e-64  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0700  branched-chain amino acid transport protein  37.05 
 
 
438 aa  248  2e-64  Bacillus cereus E33L  Bacteria  hitchhiker  0.000173599  n/a   
 
 
-
 
NC_011725  BCB4264_A0722  branched-chain amino acid transport system II carrier protein  34.86 
 
 
433 aa  246  4.9999999999999997e-64  Bacillus cereus B4264  Bacteria  unclonable  0.0000954192  n/a   
 
 
-
 
NC_011772  BCG9842_B4613  branched-chain amino acid transport system II carrier protein  34.63 
 
 
431 aa  246  4.9999999999999997e-64  Bacillus cereus G9842  Bacteria  hitchhiker  0.00164861  normal  0.198827 
 
 
-
 
NC_007954  Sden_0746  branched-chain amino acid transport system II carrier protein  36.45 
 
 
442 aa  245  9.999999999999999e-64  Shewanella denitrificans OS217  Bacteria  normal  0.707148  n/a   
 
 
-
 
NC_009674  Bcer98_0582  branched-chain amino acid transport system II carrier protein  34.98 
 
 
431 aa  245  9.999999999999999e-64  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.175279  n/a   
 
 
-
 
CP001637  EcDH1_3208  branched-chain amino acid transport system II carrier protein  35.15 
 
 
439 aa  244  3e-63  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0432  branched-chain amino acid transport system II carrier protein  35.37 
 
 
439 aa  244  3e-63  Escherichia coli SMS-3-5  Bacteria  normal  0.922576  normal 
 
 
-
 
NC_010506  Swoo_0894  branched-chain amino acid transport system II carrier protein  35.01 
 
 
449 aa  244  3e-63  Shewanella woodyi ATCC 51908  Bacteria  normal  0.45318  normal 
 
 
-
 
NC_010658  SbBS512_E0320  branched-chain amino acid transport system II carrier protein  35.15 
 
 
439 aa  244  3e-63  Shigella boydii CDC 3083-94  Bacteria  normal  0.259108  n/a   
 
 
-
 
NC_011353  ECH74115_0478  branched-chain amino acid transport system II carrier protein  35.15 
 
 
439 aa  244  3e-63  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.709941  normal 
 
 
-
 
NC_009800  EcHS_A0471  branched-chain amino acid transport system II carrier protein  35.15 
 
 
439 aa  244  3e-63  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0431  branched-chain amino acid transport system II carrier protein  35.15 
 
 
439 aa  244  3e-63  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00353  hypothetical protein  35.15 
 
 
439 aa  244  3e-63  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 2    << first  < prev  1  2    next >  last >>