| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0613 |
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| Symbol | brnQ |
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| ID | 4201420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 739939 |
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| End bp | 741213 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081498 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_695066 |
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| Protein GI | 110800743 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAACA AAAGATCAGA TTTTTTAGTA ATCGGCTTTG CACTATTCTC AATGTTTTTG
GGGGCTGGTA ACCTTATTTT CCCACCTTTA TTAGGAAGAA ATTTAGGTGC AGATTACTAT
TTAGGGATTA TAGGATTTAT AATAACTGGA GTTGGAGTAC CACTACTTGG TATATTATCT
TCAATGAGAG TTAACGGTAA GTTTGAATTA TTTGGAGATA AAGTAGGTAA AAAATTCTCA
TTAATATATT CAATAGCATT ATTTATACTT ATTGGACCAT TATTAGCTAT TCCTAGAACA
GCAGCTACTA CATTTGAATT AGCATTTGCT CCTAACTTTG CAAATATAAA TTACTTTGCA
GTAATAGTTG TTTACTTTTT AGTTAATTTA ATCTTTGTAT TAAAGCCATC AAAAGTTATA
GATGTTTTAG GTAAATTTTT AACTCCTATA TTATTAGCTA TATTATTTTT CTTAATAGCT
AAGGGAGTTC TTAGTCCAAT AGACGCTTTA ACAAAATCAT ATACTCCTGA TGCCCTTTCT
ACATCATTAC TTGAAGGATA TCAAACAATG GATGCAATTG CAGCTGTTAT ATTCTCTTCA
ATAATATTAG GTTCAATAAA AGCTAAAGGA TATACTGGTA AAGCTAGCTT TAAATTACTT
ATTAAAGCAG CAGTTATTGC AATCGGAGGA CTAGCAATAA TTTATGGTGG ATTAATCTTC
CTTGGTGCTC ATACTGGGGA TTTAGCTTTA GATTTATCAA ATTCTCAATT ATTACTTTTT
GTTGCTGAAA GTATTCTAGG ACATGCAGGT GCAATATTAA TAGGTGTATC AATGGCATTA
GCTTGTTTAA CAACTTCAAT AGGATTACTT TCTGCTGGTG GAAGCTTCTT TGAAAGAGTT
TCTAATGGTA AATTACCATA TAAATTTAAC GTTTTATTAA TGACAGTAAC TAGTATATTA
GTTGCTAGTA TGGGATTAGA TAAAATAATA TCATTATCAG CTACTTTACT TGGTGTAATC
TACCCAGTAA CAATAGTTCT TATATTATTA AATCTATTCC ATAAGAGAAT AACTAACCCA
CTTACTCATA AGGTTACTGT ATATGTTACT TTAGTAGTTA GTATATTAAT AACACTAGGT
AACTTTATAC CTGGAGTAGA AAACTTAGTT TCTCTTCTTC CACTATACTC TAAGGGATTT
GGTTGGGTAG TACCTGCTTT AGTAGGATTT ATAATACCAA GCATTATTCC TACAAGAGAA
ACTGCTACAG CTTAA
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| Protein sequence | MNNKRSDFLV IGFALFSMFL GAGNLIFPPL LGRNLGADYY LGIIGFIITG VGVPLLGILS
SMRVNGKFEL FGDKVGKKFS LIYSIALFIL IGPLLAIPRT AATTFELAFA PNFANINYFA
VIVVYFLVNL IFVLKPSKVI DVLGKFLTPI LLAILFFLIA KGVLSPIDAL TKSYTPDALS
TSLLEGYQTM DAIAAVIFSS IILGSIKAKG YTGKASFKLL IKAAVIAIGG LAIIYGGLIF
LGAHTGDLAL DLSNSQLLLF VAESILGHAG AILIGVSMAL ACLTTSIGLL SAGGSFFERV
SNGKLPYKFN VLLMTVTSIL VASMGLDKII SLSATLLGVI YPVTIVLILL NLFHKRITNP
LTHKVTVYVT LVVSILITLG NFIPGVENLV SLLPLYSKGF GWVVPALVGF IIPSIIPTRE
TATA
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