Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1811 |
Symbol | |
ID | 5189957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1861670 |
End bp | 1863055 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640591656 |
Product | branched-chain amino acid transport system II carrier protein |
Protein accession | YP_001272387 |
Protein GI | 148545017 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1114] Branched-chain amino acid permeases |
TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000231514 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATT TAACATCGCG CAAGTTAACA TTCAAAAACT ATTTAGTTGT TGCATCATTG CTTTTCGGTT TATTCTTTGG GGCCGGAAAC TTGATTTTCC CGTTACACCT TGGTCAATTA GCTGGTAGTC ATTGGGGACC AGCTGCAGTT GGCTTTCTGA TTACTGGAGT TCTTTTACCA CTTCTATCAG TTCTCGCCGT TGCTGTTACG CGTGCAGAAG GAGTCTTTGA TATCGGTCGT CCGCTTGGCG TTGGTTTTGC CTTAGTATTC ATGGTTCTTA TCCACGCTAC GATCGGTCCA TTATTCGGTA CCCCACGAAC TGCCACTGTC TCATTCACAG TTGGGCTTGC CCCATTCGTT GATAAACAAT ATCAATCCCT TGCCTTGCTA TTATTCTCAG CATTATTCTT CGGGGCGGCC TTCCTCTTCT CATACCGGGA AAATGACATC CTAGCTAATA TCGGAAAAGT ATTAAATCCC GTCTTCTTAG CCCTTTTATT CCTTGTCTTT GTTGTCGGTT TCGCTCGTCC GCTTGGTAAC CCTGCTACTG CACCTACAAC TAGTGCTTAT GTTCACGGTG CACTCACTAA CGGATTCCTT GAAGGGTACA ACACTATGGA TGCTCTTGCT GGTCTTGCGT TTGGGGTTAC AGTTGTTACT GCCGTTCGTT CAATGGGCCA ACGTACTGAA AAGGATGTCT CCAAGGTTGT TGCTAAAGCC GGTGTCCTCT CAATGGGTGC CGTTGCTTTT ATCTACTTAT TACTAATCCT TCTTGGCGCA ATGTCTCTTG GTCGTTTCAA AGTTTCCCCA GATGGTGGAG TTGCCTTTAA CCAATTAGTT AATGCTTATG CCGGTGCATT CGGACAAGTT GTACTAGCAT TCTTGTTAAC TGTCACTTGT TTAACGACGG CTGTTGGTTT AGTTGCTGCT TTTGCTCAAG ACTTCCATAA GCACTTTCCA AAGGTTAGCT ACCATGCATG GCTTGCTCTC AGTTGCCTTG CCTCTTTCCT TACTGCTAAT TTTGGCTTAG ACCAAATCAT TGCTTGGTCA ACACCAATGT TAATGTTCCT TTACCCATTA TCAATGGTGC TTATCCTTTT ATCTGTGACA TCACCACTCT TTAACCGTGA TGGCGTTGTC TACTTCTTCG TGGTCCTTTT CACCGTTGTA CCAGCTCTCG GTGATATGGT TGTTGCTTTC CCAGCGGTTG TTAGCCAAAG TTCATTTGGT TTATCTGTTG CTGCTTTGCG AAATAACTTA CCACTTGCAA GTATGGGATT ATCCTGGCTT GTTCCAGCAC TTGTCGGCTT AGTCCTTGGT CTCTTAGTTC ACTGGTACCG TCATCAACGG GTTGCTTCCA CCAGTATGCA AAGTGAAGTA CATTAA
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Protein sequence | MQDLTSRKLT FKNYLVVASL LFGLFFGAGN LIFPLHLGQL AGSHWGPAAV GFLITGVLLP LLSVLAVAVT RAEGVFDIGR PLGVGFALVF MVLIHATIGP LFGTPRTATV SFTVGLAPFV DKQYQSLALL LFSALFFGAA FLFSYRENDI LANIGKVLNP VFLALLFLVF VVGFARPLGN PATAPTTSAY VHGALTNGFL EGYNTMDALA GLAFGVTVVT AVRSMGQRTE KDVSKVVAKA GVLSMGAVAF IYLLLILLGA MSLGRFKVSP DGGVAFNQLV NAYAGAFGQV VLAFLLTVTC LTTAVGLVAA FAQDFHKHFP KVSYHAWLAL SCLASFLTAN FGLDQIIAWS TPMLMFLYPL SMVLILLSVT SPLFNRDGVV YFFVVLFTVV PALGDMVVAF PAVVSQSSFG LSVAALRNNL PLASMGLSWL VPALVGLVLG LLVHWYRHQR VASTSMQSEV H
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