Gene Lreu_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1811 
Symbol 
ID5189957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1861670 
End bp1863055 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content45% 
IMG OID640591656 
Productbranched-chain amino acid transport system II carrier protein 
Protein accessionYP_001272387 
Protein GI148545017 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1114] Branched-chain amino acid permeases 
TIGRFAM ID[TIGR00796] branched-chain amino acid uptake carrier 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000231514 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATT TAACATCGCG CAAGTTAACA TTCAAAAACT ATTTAGTTGT TGCATCATTG 
CTTTTCGGTT TATTCTTTGG GGCCGGAAAC TTGATTTTCC CGTTACACCT TGGTCAATTA
GCTGGTAGTC ATTGGGGACC AGCTGCAGTT GGCTTTCTGA TTACTGGAGT TCTTTTACCA
CTTCTATCAG TTCTCGCCGT TGCTGTTACG CGTGCAGAAG GAGTCTTTGA TATCGGTCGT
CCGCTTGGCG TTGGTTTTGC CTTAGTATTC ATGGTTCTTA TCCACGCTAC GATCGGTCCA
TTATTCGGTA CCCCACGAAC TGCCACTGTC TCATTCACAG TTGGGCTTGC CCCATTCGTT
GATAAACAAT ATCAATCCCT TGCCTTGCTA TTATTCTCAG CATTATTCTT CGGGGCGGCC
TTCCTCTTCT CATACCGGGA AAATGACATC CTAGCTAATA TCGGAAAAGT ATTAAATCCC
GTCTTCTTAG CCCTTTTATT CCTTGTCTTT GTTGTCGGTT TCGCTCGTCC GCTTGGTAAC
CCTGCTACTG CACCTACAAC TAGTGCTTAT GTTCACGGTG CACTCACTAA CGGATTCCTT
GAAGGGTACA ACACTATGGA TGCTCTTGCT GGTCTTGCGT TTGGGGTTAC AGTTGTTACT
GCCGTTCGTT CAATGGGCCA ACGTACTGAA AAGGATGTCT CCAAGGTTGT TGCTAAAGCC
GGTGTCCTCT CAATGGGTGC CGTTGCTTTT ATCTACTTAT TACTAATCCT TCTTGGCGCA
ATGTCTCTTG GTCGTTTCAA AGTTTCCCCA GATGGTGGAG TTGCCTTTAA CCAATTAGTT
AATGCTTATG CCGGTGCATT CGGACAAGTT GTACTAGCAT TCTTGTTAAC TGTCACTTGT
TTAACGACGG CTGTTGGTTT AGTTGCTGCT TTTGCTCAAG ACTTCCATAA GCACTTTCCA
AAGGTTAGCT ACCATGCATG GCTTGCTCTC AGTTGCCTTG CCTCTTTCCT TACTGCTAAT
TTTGGCTTAG ACCAAATCAT TGCTTGGTCA ACACCAATGT TAATGTTCCT TTACCCATTA
TCAATGGTGC TTATCCTTTT ATCTGTGACA TCACCACTCT TTAACCGTGA TGGCGTTGTC
TACTTCTTCG TGGTCCTTTT CACCGTTGTA CCAGCTCTCG GTGATATGGT TGTTGCTTTC
CCAGCGGTTG TTAGCCAAAG TTCATTTGGT TTATCTGTTG CTGCTTTGCG AAATAACTTA
CCACTTGCAA GTATGGGATT ATCCTGGCTT GTTCCAGCAC TTGTCGGCTT AGTCCTTGGT
CTCTTAGTTC ACTGGTACCG TCATCAACGG GTTGCTTCCA CCAGTATGCA AAGTGAAGTA
CATTAA
 
Protein sequence
MQDLTSRKLT FKNYLVVASL LFGLFFGAGN LIFPLHLGQL AGSHWGPAAV GFLITGVLLP 
LLSVLAVAVT RAEGVFDIGR PLGVGFALVF MVLIHATIGP LFGTPRTATV SFTVGLAPFV
DKQYQSLALL LFSALFFGAA FLFSYRENDI LANIGKVLNP VFLALLFLVF VVGFARPLGN
PATAPTTSAY VHGALTNGFL EGYNTMDALA GLAFGVTVVT AVRSMGQRTE KDVSKVVAKA
GVLSMGAVAF IYLLLILLGA MSLGRFKVSP DGGVAFNQLV NAYAGAFGQV VLAFLLTVTC
LTTAVGLVAA FAQDFHKHFP KVSYHAWLAL SCLASFLTAN FGLDQIIAWS TPMLMFLYPL
SMVLILLSVT SPLFNRDGVV YFFVVLFTVV PALGDMVVAF PAVVSQSSFG LSVAALRNNL
PLASMGLSWL VPALVGLVLG LLVHWYRHQR VASTSMQSEV H