| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1152 |
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| Symbol | brnQ |
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| ID | 4539174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 1140276 |
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| End bp | 1141580 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639746522 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_892310 |
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| Protein GI | 118475228 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.291372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAAAGA ATCTATTAAA AAGTGATTTT CTTATCATAT CTTTGATGCT GTTTTCCATG
TTTTTTGGAG CTGGAAACTT CATTTTTCCA CCAATGGTAG GAAAAGAAGC CGGAGAAAAT
TTATATGAAG CTATAGCATT TTTTTGCCTC ACTGCTGTTG CTTTGCCGGT ACTTGGTATA
GCGGCTGTAG CAAAAAGCGG TACGTTAGAT GCACTAGTAA AACGTGTAGA TAGACTATTT
GCGCCAATTT TTACTATATC TGTCTATATA ATTATAGGTC CACTTTTAGC AATTCCTAGA
GCTGCAAATA TGCCTTATGA AGTTAGTCTT TCGCCGTCTT TTGGAGATAG TCTACTTTTT
GTATATACCG CAGTTTATTT CATCATAAAT TATATAATCT GCATCAACAA AAGCACTATG
ATAGATACTA TAGGAAAATG GCTTGCTCCT ATTATGCTTG TGCTTATCTT TGCTCTTTTT
ATGGCTAGTA TTATAAATCC TTTAGGCGAA CTTGGCGAAG CAAGTGGAAA ATACGCAATC
AGCCCTATGT CTAGTGGATT TTTAGACGGA TATCAAACTA TGGATGCTAT GGCGGCTCTT
GTTTTTGGTA TCGTAGTTAT ACAAGCTATG AAAAGTATCG GTATAAAAGA TAATAAACGA
CTTGCAAACT CGGTTATTAG CTCTGGTATT TTAGCTGGAG TTATATTAAT GAGTATATAT
ATAATACTAT CTTATATAGG AGCTAGTAGC GCTAGCAGAT TTCCTGAAGC GGTAAACGGT
GCAAACGTAC TATCTTTAGT AACACATTAT CTATTTGGTT TTTATGGAAA GTTTATATTA
GGATCTATAT TTTTATTAGC TTGTCTTACC ACTACAGTGG GGCTTATAGG CTCAGCAAGC
GAATATTTTA GCTCTATAAT TCCTAAGCTT AGTTATAAAT TTTGGGTATT CATCTGGAGT
TTTGCTAGTT TTTGTATGGC AAACATAGGC TTAAATGATA TATTAAATTA TAGCATACCT
ATTTTAACTA CATTCTATCC GGTATCTATA GTATTGATAC TATTAGCTCT TATAAATAAT
ATTATAAACT CTTCAAAGCT GATATATCGC TCTTGTGTAT ATCTAACATT GATAATAAGC
CTTGCTTACT CCTTAGAACA AATAGGAATT AAGCTGCCTG TCATAGTAAA TATATTTAAA
AATATACCGT TTTACGATAT CGGTCTTGGC TGGGTAATAC CCGGAATCAT CTGTTTTTGC
GTCTCATACA TAATTTTTAT ACTACGAAAA AGAGGTAGTT TTTGA
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| Protein sequence | MKKNLLKSDF LIISLMLFSM FFGAGNFIFP PMVGKEAGEN LYEAIAFFCL TAVALPVLGI
AAVAKSGTLD ALVKRVDRLF APIFTISVYI IIGPLLAIPR AANMPYEVSL SPSFGDSLLF
VYTAVYFIIN YIICINKSTM IDTIGKWLAP IMLVLIFALF MASIINPLGE LGEASGKYAI
SPMSSGFLDG YQTMDAMAAL VFGIVVIQAM KSIGIKDNKR LANSVISSGI LAGVILMSIY
IILSYIGASS ASRFPEAVNG ANVLSLVTHY LFGFYGKFIL GSIFLLACLT TTVGLIGSAS
EYFSSIIPKL SYKFWVFIWS FASFCMANIG LNDILNYSIP ILTTFYPVSI VLILLALINN
IINSSKLIYR SCVYLTLIIS LAYSLEQIGI KLPVIVNIFK NIPFYDIGLG WVIPGIICFC
VSYIIFILRK RGSF
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