| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1889 |
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| Symbol | brnQ |
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| ID | 2739118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1909590 |
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| End bp | 1910978 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637160775 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | NP_972492 |
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| Protein GI | 42527394 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000356974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA AGACCACCGA TATTATTGTT ATAGGTTTTG CTTTATTTGC TATGTTTTTA
GGAGCCGGAA ACTTGATATT TCCGCCTACT TTGGGACACT TATCGGGAAA GGATTGGATT
TTTTCTCTTT TAGGTTTTTT GGTAACGGGA GTCGGAATGC CCGTTTTGGG TATCATATCC
ATGGGAAAAT GCGACGGACA TCTTTCCAAT TTTACTAAAA ATATAAACCA GTTATTCGGA
ACTTTTTTTA TAATCTTTGT TATGCTTATA ATAGGGCCGC TTTTTGCCAT TCCCAGAACT
GCAGCTACTA CTTATGAAAT AGCTATCAGA CCCAACTTCG GGATAAGCTC TGTTCTATCG
TCCTTTATAT TCTTTGCGAT TACTCTTTTC TTTGTTTTAA CCCCTAATAA TGTTATAGAT
AGGGTAGGAA AGTTTTTAAC GCCTGCCTTG ATAGCCGTTT TAGGTCTCTT GGTTATAAAG
GGCTTTATTA CTCCCATAGG TAGGCCCTCA GATCCTTCAG TCGATAAGAT ATTTTTAAGA
GGCTTTAAAG AAGGCTATCA AACTATGGAC GCTCTAGGCT CTATGATATT GGCCACAATA
GTTATTTCAA GTATCAGTGC AAAAGGCTAC ACGGAAAAAA AATCTCTTTT AAAGATGACT
ATCTGGACGG GGCTTATTGC ATGTATAGGC TTAGGTCTTG TTTACGGAGG CCTTGTATAT
GTTGGAGCAA CAGGAAGTGC CGTCTTACCC GATAATCTTT CACGAACCGA AATTGTAGTT
CAATCCAGTG AGATATTATG GGGAAGGGGA GGCCGAATAG TTTTAGGTTT GGCAATAGGT
TTGGCCTGTT TAACTACCTC AATCGGTCTT ACCGCAACTG CAGGAGAGTA TTTTTCCAAA
AGATTTAAAG ACGATATAAG CTACCGTGCC ACCGTTATCA TTATCTGTGT CGTAAGTTTT
TTCCTTTCAA ACTTCGGAGT AGATAATATT ATCTCTATTG CAGGTCCTAT TTTGGAAATT
ATTTATCCTG TAGCGATTGT GTTGATAGTT TTAAATTTGT TTGCAGAATT TATACCGAAC
AAGTACTTTT TTCATGGTGC AGTAATAGGC ACTCTTTCGA TAAGTATCCT CCAAGGCTGG
GTTGCGGCTC AAGAGCTTAT CAACAACTTA CTTATTAAAC TTGAAGCCTT TCCGGCAATG
GATCAAGTGG GTATGAGTTT TAATACTACC ATCAATGTAT TAAAGACCCT CCCCTTTGAA
GGTATAGGAT TCCCATGGCT CCTTCCTGCT TTGGGTCTTT CTCTCTTATT CGGATTTGGT
TATATTATTA TGCAAAAGAC AGAAAAAGCA CCCTCAATGA AGAGGGAATC TCAAAAAAAG
GATGAATAA
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| Protein sequence | MSKKTTDIIV IGFALFAMFL GAGNLIFPPT LGHLSGKDWI FSLLGFLVTG VGMPVLGIIS
MGKCDGHLSN FTKNINQLFG TFFIIFVMLI IGPLFAIPRT AATTYEIAIR PNFGISSVLS
SFIFFAITLF FVLTPNNVID RVGKFLTPAL IAVLGLLVIK GFITPIGRPS DPSVDKIFLR
GFKEGYQTMD ALGSMILATI VISSISAKGY TEKKSLLKMT IWTGLIACIG LGLVYGGLVY
VGATGSAVLP DNLSRTEIVV QSSEILWGRG GRIVLGLAIG LACLTTSIGL TATAGEYFSK
RFKDDISYRA TVIIICVVSF FLSNFGVDNI ISIAGPILEI IYPVAIVLIV LNLFAEFIPN
KYFFHGAVIG TLSISILQGW VAAQELINNL LIKLEAFPAM DQVGMSFNTT INVLKTLPFE
GIGFPWLLPA LGLSLLFGFG YIIMQKTEKA PSMKRESQKK DE
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