Gene CA2559_04390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_04390 
Symbol 
ID9296368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp998369 
End bp999646 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content33% 
IMG OID 
Productbranched-chain amino acid transport system carrier protein 
Protein accessionYP_003715642 
Protein GI298207463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.81441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTAC GCAAAGATGA TTTTATAGTA GGTTTTGCAT TATTTGCACT GTTCTTTGGT 
GTAGGTAATA TTGTACTACC ACCTATGTTA GGTTTTTTAG CAGGCCAAGA ATGGTATTTA
GTAGCAATCG GGTTTATAAT CACAGCTATA GGAATACCTT TACTAGGTAT TTTTGCTCAT
GCAAGAATAC AAGGTACAAT GTATGATTTT GGAAAACCTG TCTCTAAAGT CTTTAGTCTT
ATTTTCTGCA TTTTTATATA TAGCATTTCT GCTGCAATAC CTTCGCCGAG AACTGCAGCA
TTTACTTATG AGATGGCTTT TGAACCATTC TTTAACATCT CACCGTTAGC CGTTAGCATT
TTATATTTTG GACTGGTCTT CATATTTGTT GCCAAAAGAT CTACTGTATT AAATAACATT
GGAAAGTACA TAACTCCTGC TATTCTTATT TTAATATTAG GAATGATTTT CTTCGGAATT
TTTGAGGATA CTGAAACTAT GAAAGTATCT TCACTCAAAA CTCCAATACT TGACGGTTTT
TTTGAAGGCT ACCAAACTTT TGATGCTATT GGCGCATTGG TTGTTGGCGG TGTGATAATT
ATCTCGGTAA AACTTAAAGG CTACAACAAT CAAGTTGAAG CTAAAAAATT AATAACAAAA
GCCGCAATAA TATCTGCATT AGGATTACTC ATAATTTATT GCGGATTAAT TTATGAAGGT
GCATTATTTG GACATCTTTT TAGTGAAGAC GTTACAAGAA CACAATTATT ATCTGGCATA
AGCAGTTTAA CACTTGGGCC TTATGCAAGT ATTTGCCTTG CAATTCTGGT ATCTTTAGCT
TGCTTTACTA CTGCTGTAGG TATAGTAACA GGTACTGCAG ATTTTTTCTC AGACCAATTT
AAATATAAGT ACTCCTATAT TACAAGTGTT ACTACTGCGT GTTTGTTTGG TATTGTAGTC
GGCGCATTTT CAGTAGATTT TATTATTACT CTTGCATTAC CAATCCTTAT GCTAGTTTAT
CCACTAACCA TAGTATTAAT AATTCTTAAT ATACTTTCAG ATAAACTAAG GCATCAACTA
ATCATGAAGT TAGTTGTTAT TTTCACTTCT ATATTTAGTA TACCAGACGC TTTAAAAGTT
ATAGCTCCAG ATTCTCAGGT AATATCTACA ATTTCTAACA GCATACCTTT ATCTAATTTT
GGTCTCGGAT GGCTTATTCC TGCTGCCTTT GCTTTTGGTA TTGGGTACTT AATAACACTA
AGAAAACCAA TCACTTAA
 
Protein sequence
MGLRKDDFIV GFALFALFFG VGNIVLPPML GFLAGQEWYL VAIGFIITAI GIPLLGIFAH 
ARIQGTMYDF GKPVSKVFSL IFCIFIYSIS AAIPSPRTAA FTYEMAFEPF FNISPLAVSI
LYFGLVFIFV AKRSTVLNNI GKYITPAILI LILGMIFFGI FEDTETMKVS SLKTPILDGF
FEGYQTFDAI GALVVGGVII ISVKLKGYNN QVEAKKLITK AAIISALGLL IIYCGLIYEG
ALFGHLFSED VTRTQLLSGI SSLTLGPYAS ICLAILVSLA CFTTAVGIVT GTADFFSDQF
KYKYSYITSV TTACLFGIVV GAFSVDFIIT LALPILMLVY PLTIVLIILN ILSDKLRHQL
IMKLVVIFTS IFSIPDALKV IAPDSQVIST ISNSIPLSNF GLGWLIPAAF AFGIGYLITL
RKPIT