More than 300 homologs were found in PanDaTox collection
for query gene Bfae_24640 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_24640  carbohydrate ABC transporter membrane protein  100 
 
 
303 aa  602  1.0000000000000001e-171  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3602  binding-protein-dependent transport systems inner membrane component  78.55 
 
 
295 aa  484  1e-136  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_3039  binding-protein-dependent transport systems inner membrane component  53.47 
 
 
299 aa  329  3e-89  Arthrobacter sp. FB24  Bacteria  normal  0.0966024  n/a   
 
 
-
 
NC_013521  Sked_31520  carbohydrate ABC transporter membrane protein  52.04 
 
 
303 aa  283  2.0000000000000002e-75  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.424225  normal  0.830973 
 
 
-
 
NC_010816  BLD_1487  MalG-type ABC sugar transport system permease component  42.37 
 
 
288 aa  239  4e-62  Bifidobacterium longum DJO10A  Bacteria  normal  0.210522  n/a   
 
 
-
 
NC_008528  OEOE_0812  ABC-type maltose transport system, permease component  42.06 
 
 
215 aa  191  9e-48  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  35.91 
 
 
285 aa  155  9e-37  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_011899  Hore_09510  binding-protein-dependent transport systems inner membrane component  26.92 
 
 
290 aa  144  3e-33  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000548355  n/a   
 
 
-
 
NC_014165  Tbis_3249  binding-protein-dependent transporter inner membrane component  37.32 
 
 
284 aa  142  5e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2414  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
292 aa  142  6e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.161941  n/a   
 
 
-
 
NC_012848  Rleg_4749  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
294 aa  142  7e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.377096 
 
 
-
 
NC_011368  Rleg2_4664  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
294 aa  141  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.829969 
 
 
-
 
NC_013171  Apre_0240  binding-protein-dependent transport systems inner membrane component  29.86 
 
 
277 aa  138  1e-31  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1117  binding-protein-dependent transport systems inner membrane component  28.06 
 
 
275 aa  136  6.0000000000000005e-31  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4351  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
294 aa  135  8e-31  Marinomonas sp. MWYL1  Bacteria  normal  0.563894  hitchhiker  0.000776541 
 
 
-
 
NC_008699  Noca_0061  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
297 aa  135  9.999999999999999e-31  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3407  binding-protein-dependent transport systems inner membrane component  31.07 
 
 
281 aa  134  9.999999999999999e-31  Clostridium phytofermentans ISDg  Bacteria  normal  0.0224694  n/a   
 
 
-
 
NC_013525  Tter_1289  binding-protein-dependent transport systems inner membrane component  31.68 
 
 
271 aa  134  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_1945  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
271 aa  133  3.9999999999999996e-30  Arthrobacter sp. FB24  Bacteria  normal  0.232263  n/a   
 
 
-
 
NC_013526  Tter_2701  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
275 aa  132  6e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0563997  n/a   
 
 
-
 
NC_009654  Mmwyl1_2764  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
275 aa  131  1.0000000000000001e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20500  Monosaccharide-transporting ATPase  27.65 
 
 
291 aa  130  2.0000000000000002e-29  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00337016  n/a   
 
 
-
 
NC_008541  Arth_0088  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
271 aa  130  3e-29  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1152  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
292 aa  130  3e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.709264  normal  0.405077 
 
 
-
 
NC_014213  Mesil_3420  proteophosphoglycan ppg4  36.09 
 
 
272 aa  130  4.0000000000000003e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  0.257772  normal 
 
 
-
 
NC_014213  Mesil_3228  binding-protein-dependent transport systems inner membrane component  36.09 
 
 
272 aa  130  4.0000000000000003e-29  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00685083  normal 
 
 
-
 
NC_007802  Jann_3933  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
293 aa  129  5.0000000000000004e-29  Jannaschia sp. CCS1  Bacteria  normal  0.464389  normal 
 
 
-
 
NC_014165  Tbis_0067  binding-protein-dependent transporter inner membrane component  34.36 
 
 
295 aa  129  5.0000000000000004e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_13120  binding-protein-dependent transport systems inner membrane component  29.48 
 
 
281 aa  128  9.000000000000001e-29  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3406  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
289 aa  128  9.000000000000001e-29  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3677  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
304 aa  128  9.000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.842824 
 
 
-
 
NC_008261  CPF_1115  sugar ABC transporter, permease protein  28.07 
 
 
285 aa  128  1.0000000000000001e-28  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0469179  n/a   
 
 
-
 
NC_013131  Caci_7514  binding-protein-dependent transport systems inner membrane component  30.35 
 
 
277 aa  128  1.0000000000000001e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7904  binding-protein-dependent transport systems inner membrane component  30.32 
 
 
271 aa  128  1.0000000000000001e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7693  putative transmembrane permease component of ABC transporter  30.07 
 
 
286 aa  127  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.673988 
 
 
-
 
NC_009664  Krad_0974  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
296 aa  126  3e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0288746 
 
 
-
 
NC_011988  Avi_5582  ABC transporter membrane spanning protein (galacturonic acid)  29.73 
 
 
293 aa  126  4.0000000000000003e-28  Agrobacterium vitis S4  Bacteria  normal  0.542291  n/a   
 
 
-
 
NC_010816  BLD_1058  MalG-type ABC sugar transport system permease component  31.25 
 
 
277 aa  126  4.0000000000000003e-28  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01530  carbohydrate ABC transporter membrane protein  33.85 
 
 
276 aa  126  5e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1294  glucose ABC transporter, permease protein, putative  33.71 
 
 
281 aa  125  6e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4570  binding-protein-dependent transport systems inner membrane component  30 
 
 
294 aa  125  8.000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00536554  normal 
 
 
-
 
NC_010001  Cphy_3860  binding-protein-dependent transport systems inner membrane component  28.72 
 
 
291 aa  125  9e-28  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_23000  putative permease of ABC sugar transporter  34.12 
 
 
281 aa  125  9e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.109316 
 
 
-
 
NC_009656  PSPA7_1941  sugar ABC transporter permease  34.12 
 
 
281 aa  125  9e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1115  binding-protein dependent transport system inner membrane protein  33.71 
 
 
281 aa  125  1e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.539616 
 
 
-
 
NC_008010  Dgeo_2694  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
279 aa  124  1e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1088  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
292 aa  125  1e-27  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3589  binding-protein-dependent transport systems inner membrane component  31.51 
 
 
298 aa  125  1e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.370604  normal 
 
 
-
 
NC_013172  Bfae_05110  carbohydrate ABC transporter membrane protein  31.25 
 
 
295 aa  124  2e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6355  binding-protein-dependent transport systems inner membrane component  30 
 
 
294 aa  124  2e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2500  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
277 aa  124  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1657  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
284 aa  124  2e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.354053  normal  0.174244 
 
 
-
 
NC_003909  BCE_1901  sugar ABC transporter, permease protein  28.88 
 
 
277 aa  123  3e-27  Bacillus cereus ATCC 10987  Bacteria  normal  0.682079  n/a   
 
 
-
 
NC_006274  BCZK1636  sugar ABC transporter, permease  28.52 
 
 
277 aa  123  3e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1555  maltose ABC transporter, permease protein, putative  31.48 
 
 
285 aa  123  3e-27  Burkholderia thailandensis E264  Bacteria  normal  0.555505  n/a   
 
 
-
 
NC_008390  Bamb_0830  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
285 aa  124  3e-27  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0842  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
285 aa  124  3e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.90323  normal 
 
 
-
 
NC_012850  Rleg_2335  binding-protein-dependent transport systems inner membrane component  30.52 
 
 
314 aa  124  3e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0691  sugar ABC transporter, permease protein, putative  30.15 
 
 
293 aa  123  4e-27  Brucella suis 1330  Bacteria  normal  0.166963  n/a   
 
 
-
 
NC_008781  Pnap_3692  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
289 aa  123  4e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.525065  normal 
 
 
-
 
NC_009504  BOV_A0646  putative sugar ABC transporter, permease protein  30.15 
 
 
293 aa  123  4e-27  Brucella ovis ATCC 25840  Bacteria  normal  0.313073  n/a   
 
 
-
 
NC_013521  Sked_11620  ABC-type sugar transport system, permease component  30 
 
 
306 aa  123  5e-27  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.00242068  normal  0.0915178 
 
 
-
 
NC_013172  Bfae_23830  ABC-type sugar transport system, permease component  29.28 
 
 
303 aa  122  5e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2040  binding-protein-dependent transport systems inner membrane component  28.71 
 
 
305 aa  122  5e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00998336  n/a   
 
 
-
 
NC_011661  Dtur_0550  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
275 aa  122  6e-27  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000150437  n/a   
 
 
-
 
NC_012669  Bcav_3994  binding-protein-dependent transport systems inner membrane component  28.01 
 
 
303 aa  122  6e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.947348 
 
 
-
 
NC_012669  Bcav_3791  binding-protein-dependent transport systems inner membrane component  28.33 
 
 
300 aa  122  7e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal 
 
 
-
 
NC_011898  Ccel_1000  binding-protein-dependent transport systems inner membrane component  29.29 
 
 
279 aa  122  8e-27  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2216  binding-protein-dependent transport systems inner membrane component  29.77 
 
 
301 aa  122  8e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1128  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
293 aa  122  8e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0624061  hitchhiker  0.00160002 
 
 
-
 
NC_007333  Tfu_1617  putative binding-protein-dependent transport protein  29.64 
 
 
304 aa  121  9.999999999999999e-27  Thermobifida fusca YX  Bacteria  normal  0.201797  n/a   
 
 
-
 
NC_013093  Amir_0401  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
273 aa  121  9.999999999999999e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0614  binding-protein-dependent transport systems inner membrane component  31.52 
 
 
286 aa  121  9.999999999999999e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2428  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
285 aa  121  9.999999999999999e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0323033  normal 
 
 
-
 
NC_012669  Bcav_3554  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
274 aa  121  9.999999999999999e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.330294  normal  0.257699 
 
 
-
 
NC_007510  Bcep18194_A4073  ABC sugar transporter, inner membrane subunit  30.86 
 
 
285 aa  121  1.9999999999999998e-26  Burkholderia sp. 383  Bacteria  normal  0.22339  normal 
 
 
-
 
NC_008060  Bcen_0491  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
285 aa  121  1.9999999999999998e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.303102  n/a   
 
 
-
 
NC_010508  Bcenmc03_0931  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
285 aa  121  1.9999999999999998e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29880  carbohydrate ABC transporter membrane protein  29.49 
 
 
304 aa  121  1.9999999999999998e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0970  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
285 aa  121  1.9999999999999998e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05440  carbohydrate ABC transporter membrane protein  31.23 
 
 
307 aa  120  1.9999999999999998e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.050978  normal 
 
 
-
 
NC_008709  Ping_1958  ABC sugar transporter inner membrane binding protein  32.71 
 
 
281 aa  120  1.9999999999999998e-26  Psychromonas ingrahamii 37  Bacteria  normal  0.126876  normal  0.322373 
 
 
-
 
NC_009939  Dgeo_2917  ABC-type sugar transport system, permease component  32.61 
 
 
273 aa  120  1.9999999999999998e-26  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009668  Oant_3815  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
293 aa  121  1.9999999999999998e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0501667  n/a   
 
 
-
 
NC_008043  TM1040_3485  binding-protein-dependent transport systems inner membrane component  29.3 
 
 
282 aa  120  3e-26  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00882  L-arabinose transport system permease protein AraQ  29.18 
 
 
278 aa  120  3e-26  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0407955  n/a   
 
 
-
 
NC_010001  Cphy_1076  binding-protein-dependent transport systems inner membrane component  28.09 
 
 
287 aa  120  3e-26  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0320  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
300 aa  120  3e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2912  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
291 aa  120  3e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0754  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
289 aa  120  3e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.467109  normal 
 
 
-
 
NC_010001  Cphy_1531  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
275 aa  120  3e-26  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3456  binding-protein-dependent transport systems inner membrane component  29.87 
 
 
320 aa  120  3e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1508  MalG-type ABC sugar transport system permease component  29.26 
 
 
280 aa  120  3e-26  Bifidobacterium longum DJO10A  Bacteria  normal  0.183163  n/a   
 
 
-
 
NC_013526  Tter_2001  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
284 aa  120  3.9999999999999996e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.757856  n/a   
 
 
-
 
NC_007643  Rru_A0094  binding-protein dependent transport system inner membrane protein  30.5 
 
 
312 aa  120  3.9999999999999996e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0630  binding-protein-dependent transport systems inner membrane component  30.37 
 
 
285 aa  120  3.9999999999999996e-26  Burkholderia phymatum STM815  Bacteria  normal  0.434043  normal 
 
 
-
 
NC_012669  Bcav_2601  binding-protein-dependent transport systems inner membrane component  28.96 
 
 
275 aa  119  3.9999999999999996e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.260696  normal 
 
 
-
 
NC_009636  Smed_3168  binding-protein-dependent transport systems inner membrane component  30.37 
 
 
293 aa  120  3.9999999999999996e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1693  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
282 aa  120  3.9999999999999996e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.262345 
 
 
-
 
NC_013203  Apar_0606  binding-protein-dependent transport systems inner membrane component  25.99 
 
 
279 aa  119  4.9999999999999996e-26  Atopobium parvulum DSM 20469  Bacteria  normal  0.980821  normal  0.149649 
 
 
-
 
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