| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1152 |
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| Symbol | |
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| ID | 5108125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1297851 |
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| End bp | 1298729 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502376 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001186651 |
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| Protein GI | 146306186 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.709264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.405077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT CCGTGCTCGA TGCGCGCCTG GCGCCGCGCC CCGTACCCCG GGTGAGGGCC
TTCAGCCTCA GCCGCCTGGC CATTCACGCC ACCCTGATCC TGGCCTGCGC GGTGTACCTG
GTACCGTTGC TGGTGATGCT GCTGACCAGC TTCAAGACCC CCGACGACAT CCGCAGCGGC
AACCTGCTGT CGATCCCGGA CGTGTTCACC GTCATCGGCT GGGTCAAGGC CTGGGACGGC
GTCGGCGGCT ACTTCTGGAA TTCGGTGAAG ATCACCATCC CGGCGGTGCT GATCTCCACG
CTGCTCGGCG CGCTGAACGG CTACGTGCTG GCCATGTGGC GCTTTCGCGG CTCGCAGCTG
TTCTTCGGCC TGCTACTGTT CGGCTGCTTC CTGCCGTTCC AGGTGATCCT GCTGCCGGCG
TCCTTCACCC TCGGCCAGCT CGGCCTGGCC AACACCACCG AAGGCCTGGT GCTGGTGCAC
GTGGTCTATG GCCTGGCCTT CACCACGCTG TTCTTCCGCA ACTTCTATGT GAGCATTCCC
GAGGCGCTGG TGCGCGCCGC GCGTCTGGAT GGCGCCGGCT TCTTCACCAT CTTCGGACGC
ATCCTGCTGC CGATGTCGGT GCCGATCATC ATGGTCTGCC TGATCTGGCA GTTCACCCAG
ATCTGGAACG ACTTCCTGTT CGGCGTGGTG TTCGCCAGCG GCGACACCCA GCCGATCACC
GTGGCGCTGA ACAACCTGGT CAACACCAGC ACCGGGGCCA AGGAATACAA CGTCGACATG
GCCGCGGCGA TGATCGCCGG GCTGCCCACC CTGCTGGTCT ACATCCTGGC CGGTAAGTAC
TTCCTGCGCG GCCTGACGGC CGGCGCCGTC AAAGGTTGA
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| Protein sequence | MTDSVLDARL APRPVPRVRA FSLSRLAIHA TLILACAVYL VPLLVMLLTS FKTPDDIRSG
NLLSIPDVFT VIGWVKAWDG VGGYFWNSVK ITIPAVLIST LLGALNGYVL AMWRFRGSQL
FFGLLLFGCF LPFQVILLPA SFTLGQLGLA NTTEGLVLVH VVYGLAFTTL FFRNFYVSIP
EALVRAARLD GAGFFTIFGR ILLPMSVPII MVCLIWQFTQ IWNDFLFGVV FASGDTQPIT
VALNNLVNTS TGAKEYNVDM AAAMIAGLPT LLVYILAGKY FLRGLTAGAV KG
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