Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1958 |
Symbol | |
ID | 4626999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2381665 |
End bp | 2382510 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639797124 |
Product | ABC sugar transporter inner membrane binding protein |
Protein accession | YP_943326 |
Protein GI | 119945646 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.126876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.322373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTA ATAGAGTATT GATTTATAGC ATACTGAGCT TTGTCGCACT TATATATTTA ATGCCACTGG TTGTTATGCT CATCACTTCG CTCAAGGATT TAGATGAAAT TCGTTCAGGC ACCCTACTAT CTTTACCGCA GTCATTAAAT TTTGATGCTT GGGGTAAAGC CTGGGGAACT GCCTGCACCG GCGTAAGCTG TGAAGGTTTA AAAGGTTACT TCTGGAACTC TGTGCTGATC GTCGTACCGG CGGTTGCAAT TTCTACCGTA TTAGGCGCGT TAAATGGTTA TGTACTGACT AAATGGAAGT TCAAAGGCAG CGATCTATTT TTTGGTATGT TGTTAATCGG CACTATGATT CCGTTTCAAG TGATCCTGTT ACCCATGGCG CGGACTCTGG GCTTCCTTGG GTTGTCGGGG ACTACTTCCG GGTTAATTAT GGTTCACGTC ATTTATGGTC TGGCATTTAC TACCCTGTTT TTCCGTAATT ATTATATTAG TATTCCCAAT GAATTGGTGA ATGCGGCACG TATTGATGGT GCAGGTTTTT GGCTGATTTT CTGGCGGATT ATTATACCGG TATCAATACC TATTATCGTC GTATCGGTAA TCTGGCAATT CACTCAAATC TGGAACGACT TCTTGTTTGG CGTGGTTTAC TCTTCGGGTG ATTCGCAGCC GATTACGGTT GCACTGAATA ATTTGGTCAA TACCAGTACA GGTATTAAAG AATATAACGT TGATATGGCC GCGGCAATTA TTGCTGCACT GCCCACCCTG CTGGTCTATG TAGTAGCCGG TAAGTATTTC GTTAAAGGTC TCACAGCGGG TGCTGTTAAA GGATAA
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Protein sequence | MSINRVLIYS ILSFVALIYL MPLVVMLITS LKDLDEIRSG TLLSLPQSLN FDAWGKAWGT ACTGVSCEGL KGYFWNSVLI VVPAVAISTV LGALNGYVLT KWKFKGSDLF FGMLLIGTMI PFQVILLPMA RTLGFLGLSG TTSGLIMVHV IYGLAFTTLF FRNYYISIPN ELVNAARIDG AGFWLIFWRI IIPVSIPIIV VSVIWQFTQI WNDFLFGVVY SSGDSQPITV ALNNLVNTST GIKEYNVDMA AAIIAALPTL LVYVVAGKYF VKGLTAGAVK G
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