Gene Ping_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1958 
Symbol 
ID4626999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2381665 
End bp2382510 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content43% 
IMG OID639797124 
ProductABC sugar transporter inner membrane binding protein 
Protein accessionYP_943326 
Protein GI119945646 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.126876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.322373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTA ATAGAGTATT GATTTATAGC ATACTGAGCT TTGTCGCACT TATATATTTA 
ATGCCACTGG TTGTTATGCT CATCACTTCG CTCAAGGATT TAGATGAAAT TCGTTCAGGC
ACCCTACTAT CTTTACCGCA GTCATTAAAT TTTGATGCTT GGGGTAAAGC CTGGGGAACT
GCCTGCACCG GCGTAAGCTG TGAAGGTTTA AAAGGTTACT TCTGGAACTC TGTGCTGATC
GTCGTACCGG CGGTTGCAAT TTCTACCGTA TTAGGCGCGT TAAATGGTTA TGTACTGACT
AAATGGAAGT TCAAAGGCAG CGATCTATTT TTTGGTATGT TGTTAATCGG CACTATGATT
CCGTTTCAAG TGATCCTGTT ACCCATGGCG CGGACTCTGG GCTTCCTTGG GTTGTCGGGG
ACTACTTCCG GGTTAATTAT GGTTCACGTC ATTTATGGTC TGGCATTTAC TACCCTGTTT
TTCCGTAATT ATTATATTAG TATTCCCAAT GAATTGGTGA ATGCGGCACG TATTGATGGT
GCAGGTTTTT GGCTGATTTT CTGGCGGATT ATTATACCGG TATCAATACC TATTATCGTC
GTATCGGTAA TCTGGCAATT CACTCAAATC TGGAACGACT TCTTGTTTGG CGTGGTTTAC
TCTTCGGGTG ATTCGCAGCC GATTACGGTT GCACTGAATA ATTTGGTCAA TACCAGTACA
GGTATTAAAG AATATAACGT TGATATGGCC GCGGCAATTA TTGCTGCACT GCCCACCCTG
CTGGTCTATG TAGTAGCCGG TAAGTATTTC GTTAAAGGTC TCACAGCGGG TGCTGTTAAA
GGATAA
 
Protein sequence
MSINRVLIYS ILSFVALIYL MPLVVMLITS LKDLDEIRSG TLLSLPQSLN FDAWGKAWGT 
ACTGVSCEGL KGYFWNSVLI VVPAVAISTV LGALNGYVLT KWKFKGSDLF FGMLLIGTMI
PFQVILLPMA RTLGFLGLSG TTSGLIMVHV IYGLAFTTLF FRNYYISIPN ELVNAARIDG
AGFWLIFWRI IIPVSIPIIV VSVIWQFTQI WNDFLFGVVY SSGDSQPITV ALNNLVNTST
GIKEYNVDMA AAIIAALPTL LVYVVAGKYF VKGLTAGAVK G