Gene Csal_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2414 
Symbol 
ID4026851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2709708 
End bp2710586 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content62% 
IMG OID637967616 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_574460 
Protein GI92114532 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.161941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACA TGGTTCGTCG GCGTTCCACT TCGGCGCGTT TATGGCGCTT CGGGCTGTAC 
GCCCTGTTGA TCGTGGCAGC CCTGGTGTAC CTGCTGCCGC TGGTGGTGAT GATCCTGACC
TCGCTGAAGC CGCTGGAGGA AATTCGTGCC GGTGCCTTGC TGTCCCTGCC GAGCACGATC
AGCTTCGAGG CGTGGATCAA GGCCTGGAGC ACCGCCTGTA CCGGCATGCG GTGCAATGGC
ATGTCGGGGT ATTTCCTCAA CTCCATCGCC ATCGTCGTGC CTGCCGTGGC GATCTCCACG
TTCGTGGGGG CGCTCAACGG GTATGCCTTG ACCAAATGGC GGTTTCGCGG CGCCAATCTG
TGCTTCGCGC TGTTGCTGTT CGGTTGTTTC GTGCCGTTCC AGGTAGTGCT GATGCCGATG
GCCCGCACGC TGGGGTGGCT GGGCATGGCC AGCTCCACCA CCGGCCTGGT GCTGGTGCAT
GTGGTGTACG GCATCGCGTT CACCACGCTG TTCTTCCGCA ACTATTACGT TTCGGTACCC
GACGAGATGA TCGCCGCGGC CAAGCTCGAT GGCGCCGGGT TCTGGCGTAT CTTCTGGCGC
ATCCTGCTGC CGGTTTCGGG GCCCATCATC ACCGTGTCGG TGATCTGGCA GTTCACCCAG
ATCTGGAATG ACTTCCTGTT CGGGGTCTCG TTCGCGGGTT TCGACTCGCA GCCGGTGACG
GTGGCGCTCA ACAACCTGGT CAACACCTCC ACCGGGGTCA AGGAATACAA CGTCGACATG
GCGGCGGCGT TGATCGCCGC GCTCCCCACG CTGGTGGTGT ACGTACTGGC GGGCAAATAT
TTCGTGCGCG GGTTGACCGC GGGTTCCGTC AAGGGCTGA
 
Protein sequence
MANMVRRRST SARLWRFGLY ALLIVAALVY LLPLVVMILT SLKPLEEIRA GALLSLPSTI 
SFEAWIKAWS TACTGMRCNG MSGYFLNSIA IVVPAVAIST FVGALNGYAL TKWRFRGANL
CFALLLFGCF VPFQVVLMPM ARTLGWLGMA SSTTGLVLVH VVYGIAFTTL FFRNYYVSVP
DEMIAAAKLD GAGFWRIFWR ILLPVSGPII TVSVIWQFTQ IWNDFLFGVS FAGFDSQPVT
VALNNLVNTS TGVKEYNVDM AAALIAALPT LVVYVLAGKY FVRGLTAGSV KG