More than 300 homologs were found in PanDaTox collection
for query gene Sked_31520 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_31520  carbohydrate ABC transporter membrane protein  100 
 
 
303 aa  606  9.999999999999999e-173  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.424225  normal  0.830973 
 
 
-
 
NC_008541  Arth_3039  binding-protein-dependent transport systems inner membrane component  58.22 
 
 
299 aa  358  7e-98  Arthrobacter sp. FB24  Bacteria  normal  0.0966024  n/a   
 
 
-
 
NC_010816  BLD_1487  MalG-type ABC sugar transport system permease component  58.05 
 
 
288 aa  345  4e-94  Bifidobacterium longum DJO10A  Bacteria  normal  0.210522  n/a   
 
 
-
 
NC_011886  Achl_3602  binding-protein-dependent transport systems inner membrane component  50 
 
 
295 aa  296  4e-79  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_24640  carbohydrate ABC transporter membrane protein  52.04 
 
 
303 aa  267  1e-70  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0812  ABC-type maltose transport system, permease component  50.93 
 
 
215 aa  239  5.999999999999999e-62  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1117  binding-protein-dependent transport systems inner membrane component  36.78 
 
 
275 aa  184  2.0000000000000003e-45  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0240  binding-protein-dependent transport systems inner membrane component  35.38 
 
 
277 aa  181  1e-44  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09510  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
290 aa  176  3e-43  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000548355  n/a   
 
 
-
 
NC_012848  Rleg_4749  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
294 aa  174  1.9999999999999998e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.377096 
 
 
-
 
NC_011368  Rleg2_4664  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
294 aa  169  7e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.829969 
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
285 aa  159  5e-38  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_012669  Bcav_3677  binding-protein-dependent transport systems inner membrane component  36.82 
 
 
304 aa  159  5e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.842824 
 
 
-
 
NC_011661  Dtur_0550  binding-protein-dependent transport systems inner membrane component  37.26 
 
 
275 aa  158  9e-38  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000150437  n/a   
 
 
-
 
NC_008261  CPF_1115  sugar ABC transporter, permease protein  31.93 
 
 
285 aa  157  2e-37  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0469179  n/a   
 
 
-
 
NC_011899  Hore_20500  Monosaccharide-transporting ATPase  34.27 
 
 
291 aa  157  2e-37  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00337016  n/a   
 
 
-
 
NC_014165  Tbis_3249  binding-protein-dependent transporter inner membrane component  37.23 
 
 
284 aa  154  1e-36  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8234  maltose transport protein  34.33 
 
 
271 aa  154  2.9999999999999998e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.367769  normal 
 
 
-
 
NC_010816  BLD_1508  MalG-type ABC sugar transport system permease component  33.09 
 
 
280 aa  146  3e-34  Bifidobacterium longum DJO10A  Bacteria  normal  0.183163  n/a   
 
 
-
 
NC_013093  Amir_3474  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
280 aa  144  2e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  0.183676  n/a   
 
 
-
 
NC_014213  Mesil_3420  proteophosphoglycan ppg4  35.85 
 
 
272 aa  144  3e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  0.257772  normal 
 
 
-
 
NC_014213  Mesil_3228  binding-protein-dependent transport systems inner membrane component  35.85 
 
 
272 aa  144  3e-33  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00685083  normal 
 
 
-
 
NC_013721  HMPREF0424_1302  ABC transporter, permease protein  31.18 
 
 
277 aa  143  4e-33  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_4452  binding-protein-dependent transport systems inner membrane component  32.7 
 
 
274 aa  140  1.9999999999999998e-32  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_1945  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
271 aa  139  4.999999999999999e-32  Arthrobacter sp. FB24  Bacteria  normal  0.232263  n/a   
 
 
-
 
NC_008010  Dgeo_2694  binding-protein-dependent transport systems inner membrane component  35.83 
 
 
279 aa  139  6e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3407  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
281 aa  138  1e-31  Clostridium phytofermentans ISDg  Bacteria  normal  0.0224694  n/a   
 
 
-
 
NC_010816  BLD_1058  MalG-type ABC sugar transport system permease component  35.52 
 
 
277 aa  138  1e-31  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0088  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
271 aa  137  3.0000000000000003e-31  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2912  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
291 aa  137  3.0000000000000003e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2701  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
275 aa  136  5e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0563997  n/a   
 
 
-
 
NC_008699  Noca_0061  binding-protein-dependent transport systems inner membrane component  30.72 
 
 
297 aa  135  6.0000000000000005e-31  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1939  binding-protein-dependent transport systems inner membrane component  29.77 
 
 
314 aa  134  9.999999999999999e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0503026  normal  0.979613 
 
 
-
 
NC_012669  Bcav_3001  binding-protein-dependent transport systems inner membrane component  31.53 
 
 
308 aa  134  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008528  OEOE_0023  ABC-type maltose transport system, permease component  31.2 
 
 
271 aa  134  1.9999999999999998e-30  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0946  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
281 aa  134  1.9999999999999998e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2714  binding-protein-dependent transport systems inner membrane component  31.51 
 
 
288 aa  134  3e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014151  Cfla_1128  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
293 aa  133  3e-30  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0624061  hitchhiker  0.00160002 
 
 
-
 
NC_013525  Tter_1289  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
271 aa  133  3.9999999999999996e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_3987  putative sugar ABC transporter (permease protein)  34.34 
 
 
282 aa  133  3.9999999999999996e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2231  binding-protein-dependent transport systems inner membrane component  29.26 
 
 
297 aa  133  3.9999999999999996e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.807172 
 
 
-
 
NC_010001  Cphy_1531  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
275 aa  132  5e-30  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1027  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
279 aa  132  6e-30  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.006727  n/a   
 
 
-
 
NC_011899  Hore_13120  binding-protein-dependent transport systems inner membrane component  27.76 
 
 
281 aa  132  6e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6935  ABC sugar transporter, inner membrane subunit  31.47 
 
 
300 aa  132  7.999999999999999e-30  Burkholderia sp. 383  Bacteria  normal  0.111402  normal  0.938789 
 
 
-
 
NC_013172  Bfae_23830  ABC-type sugar transport system, permease component  31.35 
 
 
303 aa  132  7.999999999999999e-30  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01230  ABC-type sugar transport system, permease component  29.9 
 
 
307 aa  132  9e-30  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1308  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
277 aa  131  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1135  binding-protein-dependent transport systems inner membrane component  32.25 
 
 
276 aa  130  2.0000000000000002e-29  Clostridium cellulolyticum H10  Bacteria  normal  0.776984  n/a   
 
 
-
 
NC_012850  Rleg_1868  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
282 aa  130  3e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.766168 
 
 
-
 
NC_012669  Bcav_3621  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
275 aa  130  3e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.445359  normal  0.171456 
 
 
-
 
NC_009654  Mmwyl1_2764  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
275 aa  130  3e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2049  sugar ABC transporter (permease)  29.67 
 
 
303 aa  130  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.907779  normal 
 
 
-
 
NC_012669  Bcav_3791  binding-protein-dependent transport systems inner membrane component  30.72 
 
 
300 aa  130  4.0000000000000003e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal 
 
 
-
 
NC_013521  Sked_05240  carbohydrate ABC transporter membrane protein  31.86 
 
 
312 aa  129  5.0000000000000004e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7904  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
271 aa  129  5.0000000000000004e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3589  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
298 aa  129  6e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.370604  normal 
 
 
-
 
NC_010001  Cphy_1076  binding-protein-dependent transport systems inner membrane component  29.92 
 
 
287 aa  129  6e-29  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0294  ABC sugar transporter, inner membrane subunit  29.92 
 
 
278 aa  129  8.000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2948  binding-protein-dependent transport systems inner membrane component  32.09 
 
 
282 aa  129  8.000000000000001e-29  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1687  binding-protein-dependent transport systems inner membrane component  32.32 
 
 
282 aa  128  9.000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.437147  normal 
 
 
-
 
NC_013093  Amir_0401  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
273 aa  128  1.0000000000000001e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0809  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
281 aa  128  1.0000000000000001e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2981  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
319 aa  128  1.0000000000000001e-28  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0908171 
 
 
-
 
NC_009664  Krad_0974  binding-protein-dependent transport systems inner membrane component  32.35 
 
 
296 aa  128  1.0000000000000001e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0288746 
 
 
-
 
NC_012669  Bcav_1657  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
284 aa  127  2.0000000000000002e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.354053  normal  0.174244 
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
275 aa  127  2.0000000000000002e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0606  binding-protein-dependent transport systems inner membrane component  29.5 
 
 
279 aa  127  2.0000000000000002e-28  Atopobium parvulum DSM 20469  Bacteria  normal  0.980821  normal  0.149649 
 
 
-
 
NC_009953  Sare_3205  binding-protein-dependent transport systems inner membrane component  29.84 
 
 
319 aa  127  2.0000000000000002e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.450418 
 
 
-
 
NC_012669  Bcav_1542  binding-protein-dependent transport systems inner membrane component  34.12 
 
 
287 aa  127  2.0000000000000002e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.239875  normal  0.0256489 
 
 
-
 
NC_007333  Tfu_1617  putative binding-protein-dependent transport protein  31.76 
 
 
304 aa  127  3e-28  Thermobifida fusca YX  Bacteria  normal  0.201797  n/a   
 
 
-
 
NC_012669  Bcav_0436  binding-protein-dependent transport systems inner membrane component  30.48 
 
 
292 aa  127  3e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2001  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
284 aa  127  3e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.757856  n/a   
 
 
-
 
NC_012669  Bcav_2601  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
275 aa  126  3e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.260696  normal 
 
 
-
 
NC_009939  Dgeo_2917  ABC-type sugar transport system, permease component  33.94 
 
 
273 aa  127  3e-28  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_0616  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
275 aa  126  4.0000000000000003e-28  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1152  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
296 aa  126  4.0000000000000003e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.500307  n/a   
 
 
-
 
NC_011881  Achl_4623  binding-protein-dependent transport systems inner membrane component  32.55 
 
 
285 aa  126  5e-28  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2500  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
277 aa  125  6e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2393  binding-protein-dependent transport systems inner membrane component  34.12 
 
 
289 aa  125  6e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1220  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
276 aa  125  6e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3532  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
278 aa  126  6e-28  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.194848 
 
 
-
 
NC_013172  Bfae_01530  carbohydrate ABC transporter membrane protein  32.43 
 
 
276 aa  125  6e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1246  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
282 aa  126  6e-28  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.87004 
 
 
-
 
NC_011898  Ccel_0202  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
284 aa  125  6e-28  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2524  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
281 aa  125  6e-28  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_07090  carbohydrate ABC transporter membrane protein  31.46 
 
 
297 aa  125  7e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.484771  normal 
 
 
-
 
NC_010320  Teth514_1093  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
270 aa  125  9e-28  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  30 
 
 
276 aa  125  9e-28  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7693  putative transmembrane permease component of ABC transporter  34.23 
 
 
286 aa  125  9e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.673988 
 
 
-
 
NC_012669  Bcav_3994  binding-protein-dependent transport systems inner membrane component  30 
 
 
303 aa  125  1e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.947348 
 
 
-
 
NC_007802  Jann_3836  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
283 aa  125  1e-27  Jannaschia sp. CCS1  Bacteria  normal  0.253658  normal 
 
 
-
 
NC_013521  Sked_11560  carbohydrate ABC transporter membrane protein  33.08 
 
 
301 aa  125  1e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.626059  hitchhiker  0.00742077 
 
 
-
 
NC_011898  Ccel_1000  binding-protein-dependent transport systems inner membrane component  30.12 
 
 
279 aa  125  1e-27  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5439  binding-protein-dependent transport systems inner membrane component  31.68 
 
 
272 aa  125  1e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.691915  normal 
 
 
-
 
NC_014151  Cfla_3363  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
274 aa  124  1e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.364527  hitchhiker  0.005111 
 
 
-
 
NC_013526  Tter_2657  binding-protein-dependent transport systems inner membrane component  32.39 
 
 
283 aa  125  1e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1524  binding-protein-dependent transport systems inner membrane component  32.94 
 
 
298 aa  125  1e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0067  binding-protein-dependent transporter inner membrane component  32.99 
 
 
295 aa  124  2e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2047  binding-protein-dependent transport systems inner membrane component  33.6 
 
 
287 aa  124  2e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
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