Gene Apre_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0240 
Symbol 
ID8397014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp272612 
End bp273445 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content35% 
IMG OID644994601 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003152013 
Protein GI257065757 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG AAGAAAATAA TAATAGATTC TGGAAGTATG TTCTCTTGAT AGTGGGATCT 
TTCCTAATAT TGATTCCTCT ACTAGCTACG ATTTTTAGTT CCTTTAAAAC GACCAAGGAT
ATAATGCAAA ACTTCTTTGG CTTTCCAAAT CCAGTTACCT TGGATAACTT TAAGCGCCTA
ATAGAAGACG GAATCGGAAA ATATTTCTTA AACTCAACTA TAATTACAAT AGCATCAGTT
GTCCTAGTAA CTATATTTAT ACCAGCTGCT GCTTATTCAA TAGCAAGAAA TATGTCAAAG
TCCCGTGCAT TCAACATCAT GTATATCCTT TTAATTTTAG GGATTTTTGT ACCCTTCCAA
GTCATTATGA TTCCTATTAC AGTTATGATG AGTCGTATTG GAATGGCAAA TATCTTTGGC
CTAGTAATCC TATATCTAAC CTATTCAATC CCACAAACCT TGTTCCTCTA TGTAGGTTAT
ATCAAGCTAA GCGTACCAGA TAGCTTGGAT GAGGCAGCTG AGATTGATGG AGCTGATAGA
TTTACAACCT ATAGGAAAAT TATATTTCCT ATGCTAAAGC CAATGCACGC TACTGCCCTT
ATTATAAATG CCCTTTGGTT TTGGAATGAC TTTATGCTAC CACTCTTGAT ACTTAACAAG
TCATCAGACC TTTGGTCATT ACCTCTTTTC CAATACAACT ACACAGGTCA GTACCTAAGT
GACTACGGTC CAAGCTTTGC CTCTTATGTT GTTGGTATTA TTACCATCAC AATAGTTTAT
CTAATATTCC AGAAGAATAT TATTTCAGGA ATGAGCAAGG GTGCTGTTAA ATAG
 
Protein sequence
MKIEENNNRF WKYVLLIVGS FLILIPLLAT IFSSFKTTKD IMQNFFGFPN PVTLDNFKRL 
IEDGIGKYFL NSTIITIASV VLVTIFIPAA AYSIARNMSK SRAFNIMYIL LILGIFVPFQ
VIMIPITVMM SRIGMANIFG LVILYLTYSI PQTLFLYVGY IKLSVPDSLD EAAEIDGADR
FTTYRKIIFP MLKPMHATAL IINALWFWND FMLPLLILNK SSDLWSLPLF QYNYTGQYLS
DYGPSFASYV VGIITITIVY LIFQKNIISG MSKGAVK