Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0240 |
Symbol | |
ID | 8397014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 272612 |
End bp | 273445 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644994601 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003152013 |
Protein GI | 257065757 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG AAGAAAATAA TAATAGATTC TGGAAGTATG TTCTCTTGAT AGTGGGATCT TTCCTAATAT TGATTCCTCT ACTAGCTACG ATTTTTAGTT CCTTTAAAAC GACCAAGGAT ATAATGCAAA ACTTCTTTGG CTTTCCAAAT CCAGTTACCT TGGATAACTT TAAGCGCCTA ATAGAAGACG GAATCGGAAA ATATTTCTTA AACTCAACTA TAATTACAAT AGCATCAGTT GTCCTAGTAA CTATATTTAT ACCAGCTGCT GCTTATTCAA TAGCAAGAAA TATGTCAAAG TCCCGTGCAT TCAACATCAT GTATATCCTT TTAATTTTAG GGATTTTTGT ACCCTTCCAA GTCATTATGA TTCCTATTAC AGTTATGATG AGTCGTATTG GAATGGCAAA TATCTTTGGC CTAGTAATCC TATATCTAAC CTATTCAATC CCACAAACCT TGTTCCTCTA TGTAGGTTAT ATCAAGCTAA GCGTACCAGA TAGCTTGGAT GAGGCAGCTG AGATTGATGG AGCTGATAGA TTTACAACCT ATAGGAAAAT TATATTTCCT ATGCTAAAGC CAATGCACGC TACTGCCCTT ATTATAAATG CCCTTTGGTT TTGGAATGAC TTTATGCTAC CACTCTTGAT ACTTAACAAG TCATCAGACC TTTGGTCATT ACCTCTTTTC CAATACAACT ACACAGGTCA GTACCTAAGT GACTACGGTC CAAGCTTTGC CTCTTATGTT GTTGGTATTA TTACCATCAC AATAGTTTAT CTAATATTCC AGAAGAATAT TATTTCAGGA ATGAGCAAGG GTGCTGTTAA ATAG
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Protein sequence | MKIEENNNRF WKYVLLIVGS FLILIPLLAT IFSSFKTTKD IMQNFFGFPN PVTLDNFKRL IEDGIGKYFL NSTIITIASV VLVTIFIPAA AYSIARNMSK SRAFNIMYIL LILGIFVPFQ VIMIPITVMM SRIGMANIFG LVILYLTYSI PQTLFLYVGY IKLSVPDSLD EAAEIDGADR FTTYRKIIFP MLKPMHATAL IINALWFWND FMLPLLILNK SSDLWSLPLF QYNYTGQYLS DYGPSFASYV VGIITITIVY LIFQKNIISG MSKGAVK
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