Gene Bcav_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0436 
Symbol 
ID7860695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp485088 
End bp485966 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content66% 
IMG OID643864513 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002880461 
Protein GI229818935 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACTC TGGAGCTCAG CCGCACGCCG GTCCAGGCGG CACCGAGGAA GCGCGAGGCT 
CGCACGTCGA AGCGGCTGTC GACGCTGCTC GTGTACGTGG CGATGCTGCT GATCGCCGTC
GTCTACCTGT TCCCGCTCTT CTTCCTGCTC AACACAGCGC TCAAGGCCCC CGGCGAGTTC
AACCGGGATC CGATGGGGAT CGTGGACGCC CCGGCTCTGG AGAACTTCAG TGCCGCCTGG
CGGCAGGGCG ACTTCGGCTC ACTCGTCGCG AACAGCGTGG TCTACGCGAT GGTGAGCGCC
ACGGTCAGCA CCGTGCTGTC GGTCTTCATC GCGTTCCCGG TGGCTCGGAA CTACGTGCGA
TGGTCCAGGT TCTTCCGCGT GCTGTTCGTG ATCTCGCTGT TCCTGCCGAA CGCTCTGGTG
GCGCAGTTCC AGCTCGTCCT GCAGCTCGGG CTGTACGACA CGCGGCTCGG GTACATGCTC
CTCATGACCG CGGGGCTCGG ACTGGGACCG CTCCTGGTCA TGGGCTACCT GCGCAGTCTC
CCCCGGGAGC TGGACGAAGC GGCGGCGCTC GACGGCTGCG GGTACCTGCG GTACGTGCTC
ACGTTCGTCT TCCCGCTGTG CCGGCCCGTC GTCATCACCG TCTTCCTGCT GCAGGTCATC
GGCGTCTGGA ACGACATCAT CGGGGCGACG ATCTACCTGG CGTCCCCGGA GCTGCGCACG
ATCTCGCTCG GCCTGTTCTC GTTCTACGGG CAGTACGGCA ACAACCAGTG GGAGCTGCTG
TCGGCCGCGA CGCTCATCGT TGCCGGACCG CTGATCCTCC TCTTCCTGCT GGCGCAGCGC
TTCTTCGTCA GCGGCGCGAT CGGAGGTGCG CTGAAGTGA
 
Protein sequence
MTTLELSRTP VQAAPRKREA RTSKRLSTLL VYVAMLLIAV VYLFPLFFLL NTALKAPGEF 
NRDPMGIVDA PALENFSAAW RQGDFGSLVA NSVVYAMVSA TVSTVLSVFI AFPVARNYVR
WSRFFRVLFV ISLFLPNALV AQFQLVLQLG LYDTRLGYML LMTAGLGLGP LLVMGYLRSL
PRELDEAAAL DGCGYLRYVL TFVFPLCRPV VITVFLLQVI GVWNDIIGAT IYLASPELRT
ISLGLFSFYG QYGNNQWELL SAATLIVAGP LILLFLLAQR FFVSGAIGGA LK