Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3001 |
Symbol | |
ID | 7860112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3346989 |
End bp | 3347915 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643867099 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002883008 |
Protein GI | 229821482 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGC AATCGACTCA GGCCACGCGG CAGCTCACGG GCGACGTGCT CGCCGACGCG CCGCCCCCGG ACCGGCGCGG CCGCCGCGCC GACGGCTCAC GGCAGAAGTG GTACTCGTCC GTCACGTCGC GGATCGTGCT CATCGCACTG AGCCTGCTCT TCCTCACGCC GCTCTACTGG ATGGTCGCCT CGGCGCTCAA GAGCAACGAG GAGCTCGCGA TCTACCCGCC GACGCTCTGG CCGTCGTCGC CGATGTGGGA GAACTTCTCG CAGGCGATCG CGGCCATGCC GTTCTGGCTG TTCTTCCGCA ACACCACGGT GATCACCGTC TCGTCGGTGA TCCTCGCCGT CATCGCGAAC TTCGTCGTCG CGTACGGGTT CGGGTGCATC GAGTGGCGCG GCCGGGACAA GGTCTTCTAC ATCGTCATCG CCACGCTGTT CCTGCCGTTC CCCATCACGC TCATCCCGAT GTTCGACCTG TGGGCCAACC TCGGCTGGGT GAACACCTGG CTGCCGCTCA TCGTGCCGAA CATGTTCGCG TCCGCATTCT TCACGTTCCT GCTGAGACAG TTCCTGCTGC AAGTTCCTCA GGACATGCTC AACGCCGCGC GCGTGGACGG CGCCAGCGAG TGGCGGATCG CGTGGCGCAT CGTGTTCCCG TCGGCCCGCC CGGCGCTCAC CGCCGTCGCG ATCTTCTCCG CCGTCGGTGC GTGGAACGAC TTCATGGGAC CGCTCATCTA CCTGCAGGAG ACCAACGTCC AGACCCTGTC CATCGGGATG CAGGTGTTCC GCATGACGAA CGCGCAGGAC ATCAGCTTCA ACCTGCTCAT GGCGGCGTCG TTCCTGGTGA TCCTGCCGCT GATCGTCCTG TTCTTCGTCT TCCAGCGCTA CTTCATCAGT GGCATCACCA TCGGAGGGTT CAAGTGA
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Protein sequence | MALQSTQATR QLTGDVLADA PPPDRRGRRA DGSRQKWYSS VTSRIVLIAL SLLFLTPLYW MVASALKSNE ELAIYPPTLW PSSPMWENFS QAIAAMPFWL FFRNTTVITV SSVILAVIAN FVVAYGFGCI EWRGRDKVFY IVIATLFLPF PITLIPMFDL WANLGWVNTW LPLIVPNMFA SAFFTFLLRQ FLLQVPQDML NAARVDGASE WRIAWRIVFP SARPALTAVA IFSAVGAWND FMGPLIYLQE TNVQTLSIGM QVFRMTNAQD ISFNLLMAAS FLVILPLIVL FFVFQRYFIS GITIGGFK
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